RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ARHGEF37A1IGU5 675 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 COPAP53621 1224 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 GRIN1Q05586 938 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 CAAP1Q9H8G2 361 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 BARHL2Q9NY43 387 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 SMARCAL1Q9NZC9 954 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 ITGB1BP2Q9UKP3 347 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 CDK8P49336 464 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 EIF3EP60228 445 aaKnown RBP13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 DDIASQ8IXT1 998 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 CASKIN2Q8WXE0 1202 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 ULK4Q96C45 1275 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 TUBGCP3Q96CW5 907 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 DHX36Q9H2U1 1008 aaKnown RBP13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 SCN3BQ9NY72 215 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 PDHBP11177 359 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 PTK7Q13308 1070 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 AASDHQ4L235 1098 aaPredicted RBP13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 C7orf25Q9BPX7 421 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 RUBCNLQ9H714 662 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 C20orf96Q9NUD7 363 aaPredicted RBP13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 CDY2AQ9Y6F7 541 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 CDY1Q9Y6F8 540 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 XPAP23025 273 aaPredicted RBP13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 UTP6Q9NYH9 597 aaKnown RBP13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 STMN3Q9NZ72 180 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 PHTF1Q9UMS5 762 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 AIM2O14862 343 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 CLDN3O15551 220 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 CLK1P49759 484 aaKnown RBP13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 PADI6Q6TGC4 694 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 B4GALNT2Q8NHY0 566 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 CAVIN3Q969G5 261 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 ETAA1Q9NY74 926 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 PCSK1NQ9UHG2 260 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 IQCA1LA6NCM1 817 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 AP3B1O00203 1094 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 SNRPAP09012 282 aaKnown RBP13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 TMEM253P0C7T8 217 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 COPB2P35606 906 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 CENPCQ03188 943 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 DMC1Q14565 340 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 GRM4Q14833 912 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 DDX42Q86XP3 938 aaKnown RBP eCLIP13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 SPICE1Q8N0Z3 855 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 AGR3Q8TD06 166 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 E2F7Q96AV8 911 aa13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 MARCOQ9UEW3 520 aaPredicted RBP13.39□□□□□ -0.27
SYNCRIP-201ENST00000355238 H7C1W4 665 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 ZBTB5O15062 677 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 KCNA1Q09470 495 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 ZNF699Q32M78 642 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 PAPD7Q5XG87 772 aaKnown RBP13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 FAM160B2Q86V87 743 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 FAM193BQ96PV7 902 aaPredicted RBP13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 UNC45AQ9H3U1 944 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 CNGB3Q9NQW8 809 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 PCDHA6Q9UN73 950 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 PCDHA8Q9Y5H6 950 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 CFAP74Q9C0B2 1584 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 PP2D1A8MPX8 630 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 RNF139Q8WU17 664 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 CDYLQ9Y232 598 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 ADGRA3Q8IWK6 1321 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 MED14O60244 1454 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 ZCCHC18P0CG32 403 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 UCHL3P15374 230 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 IL6STP40189 918 aaPredicted RBP13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 HADHAP40939 763 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 ACTR2P61160 394 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 DNAJC3Q13217 504 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 ZNF394Q53GI3 561 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 TTC39BQ5VTQ0 682 aaPredicted RBP13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 DIABLOQ9NR28 239 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 CLPTM1O96005 669 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 WASHC2DQ5SRD0 308 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 EP400NLQ6ZTU2 488 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 NLRP9Q7RTR0 991 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 RNF217Q8TC41 542 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 HAO1Q9UJM8 370 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 C15orf41Q9Y2V0 281 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 USP42Q9H9J4 1324 aaKnown RBP13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 PLEKHG2Q9H7P9 1386 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 ZNF839A8K0R7 811 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 APOL1O14791 398 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 FKBP6O75344 327 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 R3HDM1Q15032 1099 aaKnown RBP13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 DEPDC1Q5TB30 811 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 CCDC103Q8IW40 242 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 TTC39CQ8N584 583 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 DCAF4Q8WV16 495 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 APEX2Q9UBZ4 518 aa13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 ZC3H7BQ9UGR2 993 aaKnown RBP13.38□□□□□ -0.27
SYNCRIP-201ENST00000355238 EMSYQ7Z589 1322 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 PSMC3P17980 439 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 PAX7P23759 505 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 CACNA2D1P54289 1103 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 PDIA5Q14554 519 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 KIAA0825Q8IV33 1275 aa13.37□□□□□ -0.27
SYNCRIP-201ENST00000355238 RXFP1Q9HBX9 757 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms