RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 HIP1RO75146 1068 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 ATF2P15336 505 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 TAC1P20366 129 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 YARSP54577 528 aaKnown RBP12.19□□□□□ -0.46
CAPN9-202ENST00000354537 SATB1Q01826 763 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 BLMHQ13867 455 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 MPP2Q14168 576 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 SETDB1Q15047 1291 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 TDRPQ86YL5 185 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 KSR1Q8IVT5 923 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 MGARPQ8TDB4 240 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 TRIM11Q96F44 468 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 TIPINQ9BVW5 301 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 IDI2Q9BXS1 227 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 DCLK3Q9C098 648 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 COQ4Q9Y3A0 265 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.19□□□□□ -0.46
CAPN9-202ENST00000354537 NEU2Q9Y3R4 380 aa12.19□□□□□ -0.46
CAPN9-202ENST00000354537 SMNDC1O75940 238 aaKnown RBP eCLIP12.18□□□□□ -0.46
CAPN9-202ENST00000354537 NEBLO76041 1014 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 NDUFB10O96000 172 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 MYBL1P10243 752 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 CHKAP35790 457 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 MXI1P50539 228 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 ITGA8P53708 1063 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 DLG4P78352 724 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 USH1GQ495M9 461 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 CGB2Q6NT52 195 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 AMIGO3Q86WK7 504 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 ZDHHC15Q96MV8 337 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 RIT2Q99578 217 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 SENP1Q9P0U3 644 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 NAALADL1Q9UQQ1 740 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 LRRC42Q9Y546 428 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 USH1CQ9Y6N9 552 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 BTAF1O14981 1849 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 FAM47DPA6NHR8 397 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 CLDN3O15551 220 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 HNRNPCL1O60812 293 aaKnown RBP12.18□□□□□ -0.46
CAPN9-202ENST00000354537 CYP11B1P15538 503 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 CREB1P16220 341 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 RASA2Q15283 850 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 CCNG2Q16589 344 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 KYNUQ16719 465 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 ANKRD20A2Q5SQ80 823 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 ANKRD20A1Q5TYW2 823 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 ANKRD20A3Q5VUR7 823 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 OTUD6AQ7L8S5 288 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 ECHDC2Q86YB7 292 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 DAW1Q8N136 415 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 CCDC89Q8N998 374 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 ANKRD42Q8N9B4 389 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 ARMC2Q8NEN0 867 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 TEKT3Q9BXF9 490 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 PITPNM3Q9BZ71 974 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 PNMA3Q9UL41 463 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 TAF1LQ8IZX4 1826 aa12.18□□□□□ -0.46
CAPN9-202ENST00000354537 K7ENM7 598 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 TRAFD1O14545 582 aaPredicted RBP12.17□□□□□ -0.46
CAPN9-202ENST00000354537 PRPF4O43172 522 aaKnown RBP eCLIP12.17□□□□□ -0.46
CAPN9-202ENST00000354537 DCTN3O75935 186 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 GCLMP48507 274 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 RASSF2P50749 326 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 POLGP54098 1239 aaPredicted RBP12.17□□□□□ -0.46
CAPN9-202ENST00000354537 CEP55Q53EZ4 464 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 CDCA2Q69YH5 1023 aaPredicted RBP12.17□□□□□ -0.46
CAPN9-202ENST00000354537 ZNF746Q6NUN9 644 aaPredicted RBP12.17□□□□□ -0.46
CAPN9-202ENST00000354537 ENOSF1Q7L5Y1 443 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 ERICH1Q86X53 443 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 C1orf54Q8WWF1 131 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 MAML1Q92585 1016 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 RMDN2Q96LZ7 410 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 KREMEN1Q96MU8 473 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 TMEM117Q9H0C3 514 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 SMG5Q9UPR3 1016 aaKnown RBP12.17□□□□□ -0.46
CAPN9-202ENST00000354537 A6NHS1 94 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 NDC80O14777 642 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 VIL1P09327 827 aaKnown RBP12.17□□□□□ -0.46
CAPN9-202ENST00000354537 POLR2MP0CAP2 368 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 DLATP10515 647 aaKnown RBP12.17□□□□□ -0.46
CAPN9-202ENST00000354537 GNAZP19086 355 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 ALDH3A1P30838 453 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 HOXA13P31271 388 aaPredicted RBP12.17□□□□□ -0.46
CAPN9-202ENST00000354537 GTF2H1P32780 548 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 GPC3P51654 580 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 FKBP1AP62942 108 aaKnown RBP12.17□□□□□ -0.46
CAPN9-202ENST00000354537 GTF2BQ00403 316 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 MGAT5Q09328 741 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 CLEC16AQ2KHT3 1053 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 WASHC2DQ5SRD0 308 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 RDH13Q8NBN7 331 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 TTC25Q96NG3 672 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 POP1Q99575 1024 aaKnown RBP12.17□□□□□ -0.46
CAPN9-202ENST00000354537 HSPBP1Q9NZL4 362 aa12.17□□□□□ -0.46
CAPN9-202ENST00000354537 RBBP6Q7Z6E9 1792 aaKnown RBP12.17□□□□□ -0.46
CAPN9-202ENST00000354537 SIPA1L1O43166 1804 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 CYP26A1O43174 497 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 RAD21O60216 631 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 ASMTLO95671 621 aa12.16□□□□□ -0.46
CAPN9-202ENST00000354537 SERPINB2P05120 415 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms