RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 EFNA5P52803 228 aa15.93■□□□□ 0.14
PRPF40A-201ENST00000354363 PSMD5Q16401 504 aa15.93■□□□□ 0.14
PRPF40A-201ENST00000354363 CEP57Q86XR8 500 aa15.93■□□□□ 0.14
PRPF40A-201ENST00000354363 SIX5Q8N196 739 aa15.93■□□□□ 0.14
PRPF40A-201ENST00000354363 LNX1Q8TBB1 728 aaPredicted RBP15.93■□□□□ 0.14
PRPF40A-201ENST00000354363 KIFAP3Q92845 792 aa15.93■□□□□ 0.14
PRPF40A-201ENST00000354363 KIF2CQ99661 725 aa15.93■□□□□ 0.14
PRPF40A-201ENST00000354363 CLSTN3Q9BQT9 956 aa15.93■□□□□ 0.14
PRPF40A-201ENST00000354363 DDX19AQ9NUU7 478 aaKnown RBP15.93■□□□□ 0.14
PRPF40A-201ENST00000354363 KIAA1024Q9UPX6 916 aa15.93■□□□□ 0.14
PRPF40A-201ENST00000354363 PTPRZ1P23471 2315 aaPredicted RBP15.92■□□□□ 0.14
PRPF40A-201ENST00000354363 PROB1E7EW31 1015 aa15.92■□□□□ 0.14
PRPF40A-201ENST00000354363 U2AF2P26368 475 aaKnown RBP eCLIP15.92■□□□□ 0.147e-7■■■■□ 19.7
PRPF40A-201ENST00000354363 TOB1P50616 345 aaPredicted RBP15.92■□□□□ 0.14
PRPF40A-201ENST00000354363 ELAVL2Q12926 359 aaKnown RBP15.92■□□□□ 0.14
PRPF40A-201ENST00000354363 PDIA5Q14554 519 aa15.92■□□□□ 0.14
PRPF40A-201ENST00000354363 ATF7IP2Q5U623 682 aa15.92■□□□□ 0.14
PRPF40A-201ENST00000354363 GET4Q7L5D6 327 aaPredicted RBP15.92■□□□□ 0.14
PRPF40A-201ENST00000354363 SLC44A3Q8N4M1 653 aa15.92■□□□□ 0.14
PRPF40A-201ENST00000354363 IGSF22Q8N9C0 903 aa15.92■□□□□ 0.14
PRPF40A-201ENST00000354363 NXPE3Q969Y0 559 aa15.92■□□□□ 0.14
PRPF40A-201ENST00000354363 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.92■□□□□ 0.14
PRPF40A-201ENST00000354363 CFHP08603 1231 aa15.91■□□□□ 0.14
PRPF40A-201ENST00000354363 LAMP2P13473 410 aa15.91■□□□□ 0.14
PRPF40A-201ENST00000354363 PTGDRQ13258 359 aa15.91■□□□□ 0.14
PRPF40A-201ENST00000354363 SNX29Q8TEQ0 813 aa15.91■□□□□ 0.14
PRPF40A-201ENST00000354363 PPP1R10Q96QC0 940 aaKnown RBP15.91■□□□□ 0.14
PRPF40A-201ENST00000354363 WNT16Q9UBV4 365 aa15.91■□□□□ 0.14
PRPF40A-201ENST00000354363 DAXXQ9UER7 740 aaPredicted RBP15.91■□□□□ 0.14
PRPF40A-201ENST00000354363 PCDHB6Q9Y5E3 794 aa15.91■□□□□ 0.14
PRPF40A-201ENST00000354363 ZFHX2Q9C0A1 2572 aaPredicted RBP15.91■□□□□ 0.14
PRPF40A-201ENST00000354363 FAM186AA6NE01 2351 aa15.91■□□□□ 0.14
PRPF40A-201ENST00000354363 KRBA1A5PL33 1030 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 ADAM12O43184 909 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 IGFBP6P24592 240 aaPredicted RBP15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 NBL1P41271 181 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 GLRA4Q5JXX5 417 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 RTP3Q9BQQ7 232 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 TNFSF13BQ9Y275 285 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 STK24Q9Y6E0 443 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 MIA3Q5JRA6 1907 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 VPS13AQ96RL7 3174 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 CFAP54Q96N23 3096 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 ANHXE9PGG2 379 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 E9PMD0 336 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 TMEM189-UBE2V1I3L0A0 370 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 K7ERI5 159 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 HNRNPA1P09651 372 aaKnown RBP eCLIP15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 SRFP11831 508 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 FGFR3P22607 806 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 FSHRP23945 695 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 LIN9Q5TKA1 542 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 PDXDC1Q6P996 788 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 CD300LGQ6UXG3 332 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 CCDC105Q8IYK2 499 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 DAW1Q8N136 415 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 RAB34Q9BZG1 259 aa15.9■□□□□ 0.14
PRPF40A-201ENST00000354363 RIF1Q5UIP0 2472 aaKnown RBP15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 PHLPP2Q6ZVD8 1323 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 CCDC169A6NNP5 214 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 PP2D1A8MPX8 630 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 C8AP07357 584 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 NPTX2P47972 431 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 CLCNKBP51801 687 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 PEX3P56589 373 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 NTHL1P78549 312 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 HTR4Q13639 388 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 IL17AQ16552 155 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 PPM1LQ5SGD2 360 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 DCLRE1AQ6PJP8 1040 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 APBB1IPQ7Z5R6 666 aaPredicted RBP15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 GRASPQ7Z6J2 395 aaPredicted RBP15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 CEP120Q8N960 986 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 ACO2Q99798 780 aaKnown RBP15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 TMEM134Q9H6X4 195 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 CA14Q9ULX7 337 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 DNM3Q9UQ16 869 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 DMDP11532 3685 aa15.89■□□□□ 0.13
PRPF40A-201ENST00000354363 CCL16O15467 120 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 HIP1RO75146 1068 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 B3GAT3O94766 335 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 CDC25AP30304 524 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 HOXA9P31269 272 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 GRM5P41594 1212 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 RAB33AQ14088 237 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 KRT79Q5XKE5 535 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 ASCL5Q7RTU5 278 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 TAS1R3Q7RTX0 852 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 DTWD2Q8NBA8 298 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 ST13P5Q8NFI4 369 aaPredicted RBP15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 UROC1Q96N76 676 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 MMTAG2Q9BU76 263 aaKnown RBP15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 RUSC1Q9BVN2 902 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 CDT1Q9H211 546 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 GOLGA2P5Q9HBQ8 144 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 PTPRHQ9HD43 1115 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 ARHGAP28Q9P2N2 729 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 MTRRQ9UBK8 725 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 ZFP37Q9Y6Q3 630 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms