RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 COL1A1P02452 1464 aaPredicted RBP13.07□□□□□ -0.32
TRERF1-202ENST00000354325 SPDYE5A6NIY4 337 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 SMIM22K7EJ46 135 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 ARFIP2P53365 341 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 SF3B3Q15393 1217 aaKnown RBP13.07□□□□□ -0.32
TRERF1-202ENST00000354325 PPP1R2P3Q6NXS1 205 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 SMIM5Q71RC9 77 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 PTPRN2Q92932 1015 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 NUDT12Q9BQG2 462 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 OSBPL8Q9BZF1 889 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 NYXQ9GZU5 481 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 VPS37BQ9H9H4 285 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 OLFML3Q9NRN5 406 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 NINJ2Q9NZG7 142 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 IPO5O00410 1097 aaKnown RBP13.07□□□□□ -0.32
TRERF1-202ENST00000354325 PSMG1O95456 288 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 RPA1P27694 616 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 GSTT1P30711 240 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
TRERF1-202ENST00000354325 PPP4CP60510 307 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 ALCAMQ13740 583 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 GIT2Q14161 759 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 DNAL1Q4LDG9 190 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 TAF1BQ53T94 588 aaPredicted RBP13.07□□□□□ -0.32
TRERF1-202ENST00000354325 IQCGQ9H095 443 aaKnown RBP13.07□□□□□ -0.32
TRERF1-202ENST00000354325 Q9H521 79 aa13.07□□□□□ -0.32
TRERF1-202ENST00000354325 CLIC2O15247 247 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 MFAP3P55082 362 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 DSG1Q02413 1049 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 SNX1Q13596 522 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 CENPUQ71F23 418 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 NUP85Q9BW27 656 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 TLE6Q9H808 572 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 ARHGEF10LQ9HCE6 1279 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 SIX2Q9NPC8 291 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 PFDN1O60925 122 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 RPS8P62241 208 aaKnown RBP13.06□□□□□ -0.32
TRERF1-202ENST00000354325 ZFYVE27Q5T4F4 411 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 ZNF804AQ7Z570 1209 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 TDRPQ86YL5 185 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 PPP2R3CQ969Q6 453 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 ARHGEF26Q96DR7 871 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 HIC2Q96JB3 615 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 DENND2DQ9H6A0 471 aaPredicted RBP13.06□□□□□ -0.32
TRERF1-202ENST00000354325 FSCN2O14926 492 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 RIMBP2O15034 1052 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 OPHN1O60890 802 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 PENKP01210 267 aaPredicted RBP13.06□□□□□ -0.32
TRERF1-202ENST00000354325 MAGEA4P43358 317 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 MAP3K21Q5TCX8 1036 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 C16orf86Q6ZW13 317 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 REEP2Q9BRK0 252 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 ZWILCHQ9H900 591 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 PARVGQ9HBI0 331 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 SSU72Q9NP77 194 aaKnown RBP13.06□□□□□ -0.32
TRERF1-202ENST00000354325 CHKBQ9Y259 395 aa13.06□□□□□ -0.32
TRERF1-202ENST00000354325 MYH1P12882 1939 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 MYH4Q9Y623 1939 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 I3L4J1 428 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 ATP5BP06576 529 aaKnown RBP13.05□□□□□ -0.32
TRERF1-202ENST00000354325 MAPK4P31152 587 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 SLC12A3P55017 1021 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 TBCCQ15814 346 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 TRMT5Q32P41 509 aaKnown RBP13.05□□□□□ -0.32
TRERF1-202ENST00000354325 LIN9Q5TKA1 542 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 IZUMO3Q5VZ72 239 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 CYP4F22Q6NT55 531 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 RELL1Q8IUW5 271 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 FAM178BQ8IXR5 827 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 DDX27Q96GQ7 796 aaKnown RBP13.05□□□□□ -0.32
TRERF1-202ENST00000354325 MTFR1LQ9H019 292 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
TRERF1-202ENST00000354325 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 UBE2TQ9NPD8 197 aaPredicted RBP13.05□□□□□ -0.32
TRERF1-202ENST00000354325 DNAJB4Q9UDY4 337 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 FRMPD4Q14CM0 1322 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 POC1B-GALNT4F8VUJ3 575 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 F8W8V4 182 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 PRDX5P30044 214 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 PGM1P36871 562 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 EPAS1Q99814 870 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 CDCA7Q9BWT1 371 aaPredicted RBP13.05□□□□□ -0.32
TRERF1-202ENST00000354325 DNAJC18Q9H819 358 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 PSMC3IPQ9P2W1 217 aaPredicted RBP13.05□□□□□ -0.32
TRERF1-202ENST00000354325 NPHP3-ACAD11A0A0J9YXS1 232 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 MYBL1P10243 752 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 DLATP10515 647 aaKnown RBP13.05□□□□□ -0.32
TRERF1-202ENST00000354325 PYGMP11217 842 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 MUTP22033 750 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 KCNJ1P48048 391 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 KLHL38Q2WGJ6 581 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 TTC27Q6P3X3 843 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 MAEAQ7L5Y9 396 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 MAPKAPK5Q8IW41 473 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 LARGE2Q8N3Y3 721 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.05□□□□□ -0.32
TRERF1-202ENST00000354325 EHMT1Q9H9B1 1298 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 CIDEBQ9UHD4 219 aa13.05□□□□□ -0.32
TRERF1-202ENST00000354325 THRAP3Q9Y2W1 955 aaKnown RBP13.05□□□□□ -0.32
TRERF1-202ENST00000354325 SMIM31A0A1B0GVY4 71 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms