RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 FAM171A1Q5VUB5 890 aa19.51■□□□□ 0.71
CKLF-202ENST00000345436 CEP57Q86XR8 500 aa19.51■□□□□ 0.71
CKLF-202ENST00000345436 FBXL6Q8N531 539 aa19.51■□□□□ 0.71
CKLF-202ENST00000345436 ACAP3Q96P50 834 aa19.51■□□□□ 0.71
CKLF-202ENST00000345436 RUSC1Q9BVN2 902 aa19.51■□□□□ 0.71
CKLF-202ENST00000345436 LIMD1Q9UGP4 676 aa19.51■□□□□ 0.71
CKLF-202ENST00000345436 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.51■□□□□ 0.71
CKLF-202ENST00000345436 B3GAT3O94766 335 aa19.5■□□□□ 0.71
CKLF-202ENST00000345436 CD2BP2O95400 341 aaKnown RBP19.5■□□□□ 0.71
CKLF-202ENST00000345436 LONP1P36776 959 aaKnown RBP19.5■□□□□ 0.71
CKLF-202ENST00000345436 LIN9Q5TKA1 542 aa19.5■□□□□ 0.71
CKLF-202ENST00000345436 MPZL3Q6UWV2 235 aa19.5■□□□□ 0.71
CKLF-202ENST00000345436 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.5■□□□□ 0.71
CKLF-202ENST00000345436 USP20Q9Y2K6 914 aa19.5■□□□□ 0.71
CKLF-202ENST00000345436 TMEM189-UBE2V1I3L0A0 370 aa19.49■□□□□ 0.71
CKLF-202ENST00000345436 SLC16A4O15374 487 aa19.49■□□□□ 0.71
CKLF-202ENST00000345436 TOM1L1O75674 476 aa19.49■□□□□ 0.71
CKLF-202ENST00000345436 PSMD5Q16401 504 aa19.49■□□□□ 0.71
CKLF-202ENST00000345436 KYAT1Q16773 422 aa19.49■□□□□ 0.71
CKLF-202ENST00000345436 KANK3Q6NY19 840 aa19.49■□□□□ 0.71
CKLF-202ENST00000345436 DAW1Q8N136 415 aa19.49■□□□□ 0.71
CKLF-202ENST00000345436 PIK3R5Q8WYR1 880 aa19.49■□□□□ 0.71
CKLF-202ENST00000345436 SMG7Q92540 1137 aaKnown RBP19.49■□□□□ 0.71
CKLF-202ENST00000345436 RABGGTAQ92696 567 aa19.49■□□□□ 0.71
CKLF-202ENST00000345436 PLIN2Q99541 437 aa19.49■□□□□ 0.71
CKLF-202ENST00000345436 TARS2Q9BW92 718 aaKnown RBP19.49■□□□□ 0.71
CKLF-202ENST00000345436 IRF2BPLQ9H1B7 796 aa19.49■□□□□ 0.71
CKLF-202ENST00000345436 WDR6Q9NNW5 1121 aaKnown RBP19.49■□□□□ 0.71
CKLF-202ENST00000345436 ODF2LQ9ULJ1 636 aa19.49■□□□□ 0.71
CKLF-202ENST00000345436 SMIM28A0A1B0GU29 152 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 VPS37CA5D8V6 355 aaPredicted RBP19.48■□□□□ 0.71
CKLF-202ENST00000345436 SFI1A8K8P3 1242 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 F8W810 466 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 TGM5O43548 720 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 KIF4AO95239 1232 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 KRT18P05783 430 aaKnown RBP19.48■□□□□ 0.71
CKLF-202ENST00000345436 MATR3P43243 847 aaKnown RBP eCLIP19.48■□□□□ 0.71
CKLF-202ENST00000345436 SLC12A3P55017 1021 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 CUL4AQ13619 759 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 ZPBP2Q6X784 338 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 RTL10Q7L3V2 364 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 KCNK18Q7Z418 384 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 HASPINQ8TF76 798 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 NXPE3Q969Y0 559 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 B3GALT6Q96L58 329 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 PNMA5Q96PV4 448 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 PPP1R10Q96QC0 940 aaKnown RBP19.48■□□□□ 0.71
CKLF-202ENST00000345436 PRKD2Q9BZL6 878 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 CDT1Q9H211 546 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 PTPRHQ9HD43 1115 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.48■□□□□ 0.71
CKLF-202ENST00000345436 IGSF9Q9P2J2 1179 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 CDH22Q9UJ99 828 aa19.48■□□□□ 0.71
CKLF-202ENST00000345436 CLDN3O15551 220 aa19.47■□□□□ 0.71
CKLF-202ENST00000345436 BRD1O95696 1058 aa19.47■□□□□ 0.71
CKLF-202ENST00000345436 RPL9P32969 192 aaKnown RBP19.47■□□□□ 0.71
CKLF-202ENST00000345436 NUBP1P53384 320 aa19.47■□□□□ 0.71
CKLF-202ENST00000345436 OSTNP61366 133 aa19.47■□□□□ 0.71
CKLF-202ENST00000345436 RAD51AP2Q09MP3 1159 aa19.47■□□□□ 0.71
CKLF-202ENST00000345436 MAPK7Q13164 816 aa19.47■□□□□ 0.71
CKLF-202ENST00000345436 TMEM119Q4V9L6 283 aa19.47■□□□□ 0.71
CKLF-202ENST00000345436 LILRA6Q6PI73 481 aa19.47■□□□□ 0.71
CKLF-202ENST00000345436 ANKS3Q6ZW76 656 aa19.47■□□□□ 0.71
CKLF-202ENST00000345436 GLYCTKQ8IVS8 523 aa19.47■□□□□ 0.71
CKLF-202ENST00000345436 BICD1Q96G01 975 aa19.47■□□□□ 0.71
CKLF-202ENST00000345436 PAAF1Q9BRP4 392 aa19.47■□□□□ 0.71
CKLF-202ENST00000345436 TDRD15B5MCY1 1934 aaKnown RBP19.47■□□□□ 0.71
CKLF-202ENST00000345436 XYLBO75191 536 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 ZMYND10O75800 440 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 FAM13AO94988 1023 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 EDN1P05305 212 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 HNRNPA1P09651 372 aaKnown RBP eCLIP19.46■□□□□ 0.71
CKLF-202ENST00000345436 SPATA31D3P0C874 917 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 KCNE1P15382 129 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 GBP2P32456 591 aaPredicted RBP19.46■□□□□ 0.71
CKLF-202ENST00000345436 TDGQ13569 410 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 NOLC1Q14978 699 aaKnown RBP eCLIP19.46■□□□□ 0.71
CKLF-202ENST00000345436 SF3A1Q15459 793 aaKnown RBP19.46■□□□□ 0.71
CKLF-202ENST00000345436 UPP1Q16831 310 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 XKR4Q5GH76 650 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 GLRA4Q5JXX5 417 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 RTP2Q5QGT7 225 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 PRSS55Q6UWB4 352 aaPredicted RBP19.46■□□□□ 0.71
CKLF-202ENST00000345436 SPATA31D4Q6ZUB0 917 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 TMEM161BQ8NDZ6 487 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 LNX1Q8TBB1 728 aaPredicted RBP19.46■□□□□ 0.71
CKLF-202ENST00000345436 ASIC4Q96FT7 647 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 CCDC39Q9UFE4 941 aa19.46■□□□□ 0.71
CKLF-202ENST00000345436 ZFP37Q9Y6Q3 630 aaPredicted RBP19.46■□□□□ 0.71
CKLF-202ENST00000345436 MAPTP10636 758 aaKnown RBP19.45■□□□□ 0.7
CKLF-202ENST00000345436 HARSP12081 509 aaKnown RBP19.45■□□□□ 0.7
CKLF-202ENST00000345436 RPL17P18621 184 aaKnown RBP19.45■□□□□ 0.7
CKLF-202ENST00000345436 PROZP22891 400 aa19.45■□□□□ 0.7
CKLF-202ENST00000345436 TXLNAP40222 546 aa19.45■□□□□ 0.7
CKLF-202ENST00000345436 CLCNKBP51801 687 aa19.45■□□□□ 0.7
CKLF-202ENST00000345436 NAB2Q15742 525 aa19.45■□□□□ 0.7
CKLF-202ENST00000345436 UVSSAQ2YD98 709 aa19.45■□□□□ 0.7
CKLF-202ENST00000345436 PPM1LQ5SGD2 360 aa19.45■□□□□ 0.7
CKLF-202ENST00000345436 ALKAL1Q6UXT8 129 aa19.45■□□□□ 0.7
CKLF-202ENST00000345436 GPBP1Q86WP2 473 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms