RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 VSIG10LQ86VR7 867 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 DAW1Q8N136 415 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 TMCO5AQ8N6Q1 288 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 IL31RAQ8NI17 732 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 ZBED3Q96IU2 234 aaPredicted RBP8.54□□□□□ -1.04
NBR1-201ENST00000341165 NUP85Q9BW27 656 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 TRIM31Q9BZY9 425 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 CNOT10Q9H9A5 744 aaKnown RBP8.54□□□□□ -1.04
NBR1-201ENST00000341165 HOMER3Q9NSC5 361 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 COL20A1Q9P218 1284 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 ASTN2O75129 1339 aaPredicted RBP8.54□□□□□ -1.04
NBR1-201ENST00000341165 AGPSO00116 658 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 NSFP46459 744 aaKnown RBP8.54□□□□□ -1.04
NBR1-201ENST00000341165 IRAK1P51617 712 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 TMED1Q13445 227 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 PLA2G4FQ68DD2 849 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 SPATA17Q96L03 361 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 VCXQ9H320 206 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 GOLPH3Q9H4A6 298 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 OSGEPQ9NPF4 335 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.54□□□□□ -1.04
NBR1-201ENST00000341165 CNOT7Q9UIV1 285 aaKnown RBP8.54□□□□□ -1.04
NBR1-201ENST00000341165 HACL1Q9UJ83 578 aa8.54□□□□□ -1.04
NBR1-201ENST00000341165 NDC80O14777 642 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 CYP26A1O43174 497 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 MAPK4P31152 587 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 DSG3P32926 999 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 PIK3CAP42336 1068 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 SLC1A1P43005 524 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 GPC3P51654 580 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 CDR2Q01850 454 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 PPP3CAQ08209 521 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 TCEAL1Q15170 157 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 ZFYVE27Q5T4F4 411 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 DPY19L2P1Q6NXN4 242 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 TADA2BQ86TJ2 420 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 FAM71AQ8IYT1 594 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 TSEN2Q8NCE0 465 aaKnown RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 USP6NLQ92738 828 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 ZSWIM1Q9BR11 485 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 ERP44Q9BS26 406 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 POLR3FQ9H1D9 316 aaPredicted RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 NENFQ9UMX5 172 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 PHF20L1A8MW92 1017 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 TTI1O43156 1089 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 DAPK3O43293 454 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 EXTL3O43909 919 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 ATP5DP30049 168 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 ELF1P32519 619 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 HPDP32754 393 aaPredicted RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 AP3M2P53677 418 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 ERVK-9P63128 1117 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 TBC1D10BQ4KMP7 808 aaPredicted RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 NAA35Q5VZE5 725 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 ARHGEF19Q8IW93 802 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 IQCKQ8N0W5 287 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 ANKRD35Q8N283 1001 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 CHST13Q8NET6 341 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 GBP5Q96PP8 586 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 TMEM165Q9HC07 324 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 MRPL47Q9HD33 250 aaKnown RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 PPP2R3BQ9Y5P8 575 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 SIPA1L1O43166 1804 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 MYO1FO00160 1098 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 SHOX2O60902 331 aaPredicted RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 GAS8O95995 478 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 GMPSP49915 693 aaPredicted RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 ATP1A2P50993 1020 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 PPATQ06203 517 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 SF3A3Q12874 501 aaKnown RBP eCLIP8.53□□□□□ -1.04
NBR1-201ENST00000341165 SRLQ86TD4 932 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 LRRC43Q8N309 656 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 TMEM161BQ8NDZ6 487 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 PARD3BQ8TEW8 1205 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 ZNF302Q9NR11 478 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 CNOT8Q9UFF9 292 aaKnown RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 AJAP1Q9UKB5 411 aaPredicted RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 BCS1LQ9Y276 419 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 USP20Q9Y2K6 914 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 SRRM3A6NNA2 597 aaPredicted RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 VIMP08670 466 aaKnown RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 TBXAS1P24557 533 aaPredicted RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 HSD17B3P37058 310 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 GCNT1Q02742 428 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 CYP24A1Q07973 514 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 SURF1Q15526 300 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 MTERF2Q49AM1 385 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 WDR78Q5VTH9 848 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 MYLK4Q86YV6 388 aaPredicted RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 CBWD2Q8IUF1 395 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 WDR75Q8IWA0 830 aaKnown RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 BBOF1Q8ND07 529 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 AZI2Q9H6S1 392 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 GPRC5CQ9NQ84 441 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 CYP26B1Q9NR63 512 aa8.53□□□□□ -1.04
NBR1-201ENST00000341165 PAIP2BQ9ULR5 123 aaKnown RBP8.53□□□□□ -1.04
NBR1-201ENST00000341165 ECEL1O95672 775 aa8.52□□□□□ -1.05
NBR1-201ENST00000341165 YWHAEP62258 255 aaKnown RBP8.52□□□□□ -1.05
NBR1-201ENST00000341165 DLG4P78352 724 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms