RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 VNN1O95497 513 aa17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 SLC25A27O95847 323 aa17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 HLA-DRAP01903 254 aa17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 CYP1A2P05177 515 aa17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 COMTP21964 271 aa17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 LMAN1P49257 510 aa17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 HSDL1Q3SXM5 330 aa17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 SEZ6Q53EL9 994 aa17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 ALS2CLQ60I27 953 aa17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 SPOPLQ6IQ16 392 aa17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 DDX42Q86XP3 938 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 UPF1Q92900 1129 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 BTBD6Q96KE9 485 aa17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 TAF1DQ9H5J8 278 aaPredicted RBP17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 TMEM134Q9H6X4 195 aa17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 C1orf112Q9NSG2 853 aa17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 LOC285556D6RIA3 1793 aa17.09■□□□□ 0.33
CCDC144A-202ENST00000340621 BHMG1C9JSJ3 638 aaPredicted RBP17.08■□□□□ 0.33
CCDC144A-202ENST00000340621 MTA2O94776 668 aa17.08■□□□□ 0.33
CCDC144A-202ENST00000340621 MARK3P27448 753 aa17.08■□□□□ 0.33
CCDC144A-202ENST00000340621 BIRC3Q13489 604 aa17.08■□□□□ 0.33
CCDC144A-202ENST00000340621 WDR44Q5JSH3 913 aa17.08■□□□□ 0.33
CCDC144A-202ENST00000340621 C9orf131Q5VYM1 1079 aa17.08■□□□□ 0.33
CCDC144A-202ENST00000340621 ACAD10Q6JQN1 1059 aa17.08■□□□□ 0.33
CCDC144A-202ENST00000340621 AADACL2Q6P093 401 aa17.08■□□□□ 0.33
CCDC144A-202ENST00000340621 TRIM50Q86XT4 487 aa17.08■□□□□ 0.33
CCDC144A-202ENST00000340621 GLG1Q92896 1179 aa17.08■□□□□ 0.33
CCDC144A-202ENST00000340621 GPR20Q99678 358 aa17.08■□□□□ 0.33
CCDC144A-202ENST00000340621 NUP85Q9BW27 656 aa17.08■□□□□ 0.33
CCDC144A-202ENST00000340621 AZI2Q9H6S1 392 aa17.08■□□□□ 0.33
CCDC144A-202ENST00000340621 TRPC6Q9Y210 931 aa17.08■□□□□ 0.33
CCDC144A-202ENST00000340621 ADGRA2Q96PE1 1338 aa17.08■□□□□ 0.32
CCDC144A-202ENST00000340621 ECHS1P30084 290 aa17.08■□□□□ 0.32
CCDC144A-202ENST00000340621 MARCKSL1P49006 195 aa17.08■□□□□ 0.32
CCDC144A-202ENST00000340621 ZNF653Q96CK0 615 aa17.08■□□□□ 0.32
CCDC144A-202ENST00000340621 OPTNQ96CV9 577 aa17.08■□□□□ 0.32
CCDC144A-202ENST00000340621 RPS6KC1Q96S38 1066 aa17.08■□□□□ 0.32
CCDC144A-202ENST00000340621 SLITRK6Q9H5Y7 841 aa17.08■□□□□ 0.32
CCDC144A-202ENST00000340621 DICER1Q9UPY3 1922 aaKnown RBP17.08■□□□□ 0.32
CCDC144A-202ENST00000340621 TTI1O43156 1089 aa17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 LDHAP00338 332 aaKnown RBP17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 NF2P35240 595 aa17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 COPB2P35606 906 aa17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 PIK3CAP42336 1068 aa17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 PEX5P50542 639 aa17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 POU5F1Q01860 360 aaKnown RBP17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 MKRN4PQ13434 485 aaPredicted RBP17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 CLEC16AQ2KHT3 1053 aa17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 CELF3Q5SZQ8 465 aaKnown RBP17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 SCARA3Q6AZY7 606 aa17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 CPNE8Q86YQ8 564 aa17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 IQCKQ8N0W5 287 aa17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 ZNF564Q8TBZ8 553 aaPredicted RBP17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 SH3GL2Q99962 352 aa17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 CELF4Q9BZC1 486 aaKnown RBP17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 GTF3C4Q9UKN8 822 aa17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 PTPRFP10586 1907 aa17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 CNTNAP2Q9UHC6 1331 aa17.07■□□□□ 0.32
CCDC144A-202ENST00000340621 DNAJC25-GNG10A0A024R161 153 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 MIF4GDA9UHW6 222 aaKnown RBP17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 HSF2BPO75031 334 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 HARSP12081 509 aaKnown RBP17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 PPIL2Q13356 520 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 TMEM63BQ5T3F8 832 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 MAATS1Q7Z4T9 603 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 UBL4BQ8N7F7 174 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 CCDC26Q8TAB7 109 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 WHAMMQ8TF30 809 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 ZIM3Q96PE6 472 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 ZSWIM1Q9BR11 485 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 APOBEC3GQ9HC16 384 aaKnown RBP17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 A0A0G2JMZ2 1700 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 ZBTB42B2RXF5 422 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 SRGAP2CP0DJJ0 459 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 YBX3P16989 372 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 CUL1Q13616 776 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 HLTFQ14527 1009 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 KCTD2Q14681 263 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 GPAT2Q6NUI2 795 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 MREGQ8N565 214 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 EIF1ADQ8N9N8 165 aaKnown RBP17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 OR5B17Q8NGF7 314 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 PIK3R5Q8WYR1 880 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 CD101Q93033 1021 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 FAM81BQ96LP2 452 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 MMP19Q99542 508 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 ERVK-5Q9HDB9 667 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 PCDHB2Q9Y5E7 798 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 MYH9P35579 1960 aaKnown RBP17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 SBF1O95248 1867 aa17.06■□□□□ 0.32
CCDC144A-202ENST00000340621 NOP56O00567 594 aaKnown RBP17.05■□□□□ 0.32
CCDC144A-202ENST00000340621 CLDN3O15551 220 aa17.05■□□□□ 0.32
CCDC144A-202ENST00000340621 UNGP13051 313 aaPredicted RBP17.05■□□□□ 0.32
CCDC144A-202ENST00000340621 ACO1P21399 889 aaKnown RBP17.05■□□□□ 0.32
CCDC144A-202ENST00000340621 WDR78Q5VTH9 848 aa17.05■□□□□ 0.32
CCDC144A-202ENST00000340621 FBXO16Q8IX29 292 aaPredicted RBP17.05■□□□□ 0.32
CCDC144A-202ENST00000340621 LRRC71Q8N4P6 559 aa17.05■□□□□ 0.32
CCDC144A-202ENST00000340621 BBXQ8WY36 941 aaPredicted RBP17.05■□□□□ 0.32
CCDC144A-202ENST00000340621 NAP1L3Q99457 506 aaPredicted RBP17.05■□□□□ 0.32
CCDC144A-202ENST00000340621 PAPPA2Q9BXP8 1791 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms