RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 TUFT1Q9NNX1 390 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 ASNSD1Q9NWL6 643 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 ZFATQ9P243 1243 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 DAPK2Q9UIK4 370 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 TNKSO95271 1327 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 PNMA6EA0A0J9YXQ4 647 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 C1orf232A0A0U1RR37 186 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 RGS20O76081 388 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 BCAP31P51572 246 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 ITGB3BPQ13352 177 aaPredicted RBP13.49□□□□□ -0.25
USP47-202ENST00000339865 TAF5Q15542 800 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 MTERF2Q49AM1 385 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 SGO1Q5FBB7 561 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 LRRC8DQ7L1W4 858 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 VSTM4Q8IW00 320 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 CCT8L2Q96SF2 557 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 FAM129BQ96TA1 746 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 STK39Q9UEW8 545 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 USP15Q9Y4E8 981 aaPredicted RBP13.49□□□□□ -0.25
USP47-202ENST00000339865 HMGB3O15347 200 aaKnown RBP13.49□□□□□ -0.25
USP47-202ENST00000339865 ITGA3P26006 1051 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 VSNL1P62760 191 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 NAIF1Q69YI7 327 aaPredicted RBP13.49□□□□□ -0.25
USP47-202ENST00000339865 CDYLQ9Y232 598 aa13.49□□□□□ -0.25
USP47-202ENST00000339865 ADCY9O60503 1353 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 ARSEP51690 589 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 GPC5P78333 572 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 GTF2IP78347 998 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 ZNF618Q5T7W0 954 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 IFNL3Q8IZI9 196 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 ACAP3Q96P50 834 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 EMILIN3Q9NT22 766 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 MROH5Q6ZUA9 1318 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 FAM25AB3EWG3 89 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 FAM25CB3EWG5 89 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 FAM25GB3EWG6 89 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 ERAP1Q9NZ08 941 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.48□□□□□ -0.25
USP47-202ENST00000339865 STX7O15400 261 aaKnown RBP13.48□□□□□ -0.25
USP47-202ENST00000339865 ABCD1P33897 745 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 NUP107P57740 925 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 MTHFSDQ2M296 383 aaKnown RBP13.48□□□□□ -0.25
USP47-202ENST00000339865 PRR23CQ6ZRP0 262 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 WNK4Q96J92 1243 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 ELMO2Q96JJ3 720 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 FOXP1Q9H334 677 aaPredicted RBP13.48□□□□□ -0.25
USP47-202ENST00000339865 NOL6Q9H6R4 1146 aaKnown RBP13.48□□□□□ -0.25
USP47-202ENST00000339865 CAPN10Q9HC96 672 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 APPL1Q9UKG1 709 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 ZNF862O60290 1169 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 S100A6P06703 90 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 GSTM1P09488 218 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 DGKKQ5KSL6 1271 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 AGGF1Q8N302 714 aaeCLIP13.48□□□□□ -0.25
USP47-202ENST00000339865 DCUN1D1Q96GG9 259 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 ADAM30Q9UKF2 790 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 TPST1O60507 370 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 PLCG1P19174 1290 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 MARCH10Q8NA82 808 aaPredicted RBP13.48□□□□□ -0.25
USP47-202ENST00000339865 TM6SF1Q9BZW5 370 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 PIGUQ9H490 435 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 DYRK4Q9NR20 520 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 ABHD10Q9NUJ1 306 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 UVRAGQ9P2Y5 699 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 PRR23AA6NEV1 266 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 EVPLLA8MZ36 301 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 SMNDC1O75940 238 aaKnown RBP eCLIP13.48□□□□□ -0.25
USP47-202ENST00000339865 NCKAP1LP55160 1127 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 MICALL2Q8IY33 904 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 RAET1EQ8TD07 263 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 THAP9Q9H5L6 903 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 SH3TC1Q8TE82 1336 aa13.48□□□□□ -0.25
USP47-202ENST00000339865 RPS7P62081 194 aaKnown RBP13.47□□□□□ -0.25
USP47-202ENST00000339865 MAN1C1Q9NR34 630 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 SLC9A2Q9UBY0 812 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 DBR1Q9UK59 544 aaKnown RBP13.47□□□□□ -0.25
USP47-202ENST00000339865 PCDHGA3Q9Y5H0 932 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 GUCA1AP43080 201 aaPredicted RBP13.47□□□□□ -0.25
USP47-202ENST00000339865 FUT11Q495W5 492 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 EPS8L2Q9H6S3 715 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 TRPC7Q9HCX4 862 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 HDAC6Q9UBN7 1215 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 A0A1W2PRG6 482 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 E2F8A0AVK6 867 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 PARP10Q53GL7 1025 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 OLFML1Q6UWY5 402 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 G2E3Q7L622 706 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 DPP10Q8N608 796 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 DDI1Q8WTU0 396 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 AGAP3Q96P47 875 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 PKP3Q9Y446 797 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 MORC2Q9Y6X9 1032 aaPredicted RBP13.47□□□□□ -0.25
USP47-202ENST00000339865 CC2D2AQ9P2K1 1620 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 KIF21AQ7Z4S6 1674 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 SEMA3DO95025 777 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 FGAP02671 866 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 PIK3R1P27986 724 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 E4F1Q66K89 784 aaPredicted RBP13.47□□□□□ -0.25
USP47-202ENST00000339865 CD248Q9HCU0 757 aa13.47□□□□□ -0.25
USP47-202ENST00000339865 ATP6V1HQ9UI12 483 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms