RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ANAPC5Q9UJX4 755 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 NAALADL1Q9UQQ1 740 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 CETN1Q12798 172 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 RNF43Q68DV7 783 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 LONP2Q86WA8 852 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 OLIG1Q8TAK6 271 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 UTP4Q969X6 686 aaKnown RBP14.65□□□□□ -0.06
SYNE3-201ENST00000334258 PRKAG3Q9UGI9 489 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 MAPK13O15264 365 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 HOXA10P31260 410 aaPredicted RBP14.65□□□□□ -0.06
SYNE3-201ENST00000334258 PEX5P50542 639 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 ITGA8P53708 1063 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 SNAP25P60880 206 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 QRICH1Q2TAL8 776 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 SLC30A10Q6XR72 485 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 ARMCX6Q7L4S7 300 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 FAM178BQ8IXR5 827 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 ANKRD35Q8N283 1001 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 STK32AQ8WU08 396 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 GRAMD1AQ96CP6 724 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 RPS6KC1Q96S38 1066 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 PLVAPQ9BX97 442 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 PPP1R12CQ9BZL4 782 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 GPR88Q9GZN0 384 aa14.65□□□□□ -0.06
SYNE3-201ENST00000334258 LY75O60449 1722 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 GPR75-ASB3A0A0A6YYF3 556 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 COQ9O75208 318 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 CCNB1P14635 433 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 ATF2P15336 505 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 TAC1P20366 129 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 USH1GQ495M9 461 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 RBM26Q5T8P6 1007 aaKnown RBP14.64□□□□□ -0.07
SYNE3-201ENST00000334258 AGGF1Q8N302 714 aaeCLIP14.64□□□□□ -0.078e-11■■■■■ 48.3
SYNE3-201ENST00000334258 ZNF564Q8TBZ8 553 aaPredicted RBP14.64□□□□□ -0.07
SYNE3-201ENST00000334258 MASTLQ96GX5 879 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 NUP85Q9BW27 656 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 PAPOLBQ9NRJ5 636 aaKnown RBP14.64□□□□□ -0.07
SYNE3-201ENST00000334258 KIAA1551Q9HCM1 1747 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 MYO3BQ8WXR4 1341 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 UBR3Q6ZT12 1888 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 A6NHS1 94 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 GAS8O95995 478 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 GNAT1P11488 350 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 ITIH2P19823 946 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 POLD1P28340 1107 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 FOXN2P32314 431 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 SKIV2L2P42285 1042 aaKnown RBP14.64□□□□□ -0.07
SYNE3-201ENST00000334258 RHBDL3P58872 404 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 GPATCH4Q5T3I0 446 aaKnown RBP14.64□□□□□ -0.07
SYNE3-201ENST00000334258 CGB2Q6NT52 195 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 ZNF653Q96CK0 615 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 ACP6Q9NPH0 428 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 AAASQ9NRG9 546 aa14.64□□□□□ -0.07
SYNE3-201ENST00000334258 CDH16O75309 829 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 ATP5HO75947 161 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 IL1R1P14778 569 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 EPHB2P29323 1055 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 BMT2Q1RMZ1 405 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 ANO7Q6IWH7 933 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 RINT1Q6NUQ1 792 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 TMEM154Q6P9G4 183 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 FAM13CQ8NE31 585 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 SPOCK2Q92563 424 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 SNF8Q96H20 258 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 SYT11Q9BT88 431 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 KIAA1683Q9H0B3 1180 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 PCIF1Q9H4Z3 704 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 PARVGQ9HBI0 331 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 SLCO1B3Q9NPD5 702 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 CYP39A1Q9NYL5 469 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 ENTPD5O75356 428 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 CBX6O95503 412 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 ALAS1P13196 640 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 GAP43P17677 238 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 ALDH1B1P30837 517 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 POLGP54098 1239 aaPredicted RBP14.63□□□□□ -0.07
SYNE3-201ENST00000334258 ODR4Q5SWX8 454 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 TEKT4Q8WW24 435 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 EIF2AK1Q9BQI3 630 aaKnown RBP14.63□□□□□ -0.07
SYNE3-201ENST00000334258 TBC1D10AQ9BXI6 508 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 ADAM33Q9BZ11 813 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 ZNF277Q9NRM2 450 aaPredicted RBP14.63□□□□□ -0.07
SYNE3-201ENST00000334258 STK32BQ9NY57 414 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 WHRNQ9P202 907 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 LAMB1P07942 1786 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 ZBTB39O15060 712 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 FAM163BP0C2L3 166 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 PECAM1P16284 738 aaPredicted RBP14.63□□□□□ -0.07
SYNE3-201ENST00000334258 KRT15P19012 456 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 GCLMP48507 274 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 RASSF2P50749 326 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 PAPOLAP51003 745 aaKnown RBP14.63□□□□□ -0.07
SYNE3-201ENST00000334258 MRPS35P82673 323 aaKnown RBP14.63□□□□□ -0.07
SYNE3-201ENST00000334258 MTA1Q13330 715 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 KIF22Q14807 665 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 CAPN12Q6ZSI9 719 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 DNAJC9Q8WXX5 260 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 GLT8D2Q9H1C3 349 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 CHST7Q9NS84 486 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 PHTF1Q9UMS5 762 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms