RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 LPAR1Q92633 364 aa21.29■■□□□ 1
SOX2-201ENST00000325404 FBXL18Q96ME1 805 aa21.29■■□□□ 1
SOX2-201ENST00000325404 AZI2Q9H6S1 392 aa21.29■■□□□ 1
SOX2-201ENST00000325404 FBXO28Q9NVF7 368 aa21.29■■□□□ 1
SOX2-201ENST00000325404 COL20A1Q9P218 1284 aa21.29■■□□□ 1
SOX2-201ENST00000325404 ECEL1O95672 775 aa21.29■■□□□ 1
SOX2-201ENST00000325404 PDE6CP51160 858 aa21.29■■□□□ 1
SOX2-201ENST00000325404 MNAT1P51948 309 aa21.29■■□□□ 1
SOX2-201ENST00000325404 JAK3P52333 1124 aa21.29■■□□□ 1
SOX2-201ENST00000325404 ANGEL2Q5VTE6 544 aaKnown RBP21.29■■□□□ 1
SOX2-201ENST00000325404 TAOK1Q7L7X3 1001 aa21.29■■□□□ 1
SOX2-201ENST00000325404 CCDC50Q8IVM0 306 aa21.29■■□□□ 1
SOX2-201ENST00000325404 PPM1KQ8N3J5 372 aa21.29■■□□□ 1
SOX2-201ENST00000325404 ZNF653Q96CK0 615 aa21.29■■□□□ 1
SOX2-201ENST00000325404 MFSD14AQ96MC6 490 aa21.29■■□□□ 1
SOX2-201ENST00000325404 KIAA1683Q9H0B3 1180 aa21.29■■□□□ 1
SOX2-201ENST00000325404 GPRC5DQ9NZD1 345 aa21.29■■□□□ 1
SOX2-201ENST00000325404 WDR46O15213 610 aaKnown RBP21.28■■□□□ 1
SOX2-201ENST00000325404 SFNP31947 248 aa21.28■■□□□ 1
SOX2-201ENST00000325404 PSMC5P62195 406 aa21.28■■□□□ 1
SOX2-201ENST00000325404 GPC2Q8N158 579 aa21.28■■□□□ 1
SOX2-201ENST00000325404 ANKS4BQ8N8V4 417 aa21.28■■□□□ 1
SOX2-201ENST00000325404 DDX1Q92499 740 aaKnown RBP21.28■■□□□ 1
SOX2-201ENST00000325404 NT5C1BQ96P26 610 aa21.28■■□□□ 1
SOX2-201ENST00000325404 SLC40A1Q9NP59 571 aa21.28■■□□□ 1
SOX2-201ENST00000325404 TBX20Q9UMR3 447 aa21.28■■□□□ 1
SOX2-201ENST00000325404 DNM1LO00429 736 aa21.28■■□□□ 1
SOX2-201ENST00000325404 RASGRF2O14827 1237 aa21.28■■□□□ 1
SOX2-201ENST00000325404 RDM1Q8NG50 284 aa21.28■■□□□ 1
SOX2-201ENST00000325404 SEMA4DQ92854 862 aa21.28■■□□□ 1
SOX2-201ENST00000325404 AGBL1Q96MI9 1066 aa21.28■■□□□ 1
SOX2-201ENST00000325404 C17orf75Q9HAS0 396 aa21.28■■□□□ 1
SOX2-201ENST00000325404 SLC16A4O15374 487 aa21.27■■□□□ 1
SOX2-201ENST00000325404 ZC3H11AO75152 810 aaKnown RBP eCLIP21.27■■□□□ 1
SOX2-201ENST00000325404 DNAJC8O75937 253 aaPredicted RBP21.27■■□□□ 1
SOX2-201ENST00000325404 CALCOCO2Q13137 446 aa21.27■■□□□ 1
SOX2-201ENST00000325404 XRCC4Q13426 336 aa21.27■■□□□ 1
SOX2-201ENST00000325404 MTMR1Q13613 665 aa21.27■■□□□ 1
SOX2-201ENST00000325404 FBXL13Q8NEE6 735 aa21.27■■□□□ 1
SOX2-201ENST00000325404 IL31RAQ8NI17 732 aa21.27■■□□□ 1
SOX2-201ENST00000325404 TRPM4Q8TD43 1214 aa21.27■■□□□ 1
SOX2-201ENST00000325404 SPIRE2Q8WWL2 714 aa21.27■■□□□ 1
SOX2-201ENST00000325404 NTPCRQ9BSD7 190 aaKnown RBP21.27■■□□□ 1
SOX2-201ENST00000325404 AVENQ9NQS1 362 aaPredicted RBP21.27■■□□□ 1
SOX2-201ENST00000325404 INTS9Q9NV88 658 aaKnown RBP21.27■■□□□ 1
SOX2-201ENST00000325404 CHUKO15111 745 aa21.27■■□□□ 1
SOX2-201ENST00000325404 GRIN3BO60391 1043 aa21.27■■□□□ 1
SOX2-201ENST00000325404 GSTA1P08263 222 aa21.27■■□□□ 1
SOX2-201ENST00000325404 ITIH2P19823 946 aa21.27■■□□□ 1
SOX2-201ENST00000325404 ADSSP30520 456 aa21.27■■□□□ 1
SOX2-201ENST00000325404 SCTRP47872 440 aa21.27■■□□□ 1
SOX2-201ENST00000325404 PEX3P56589 373 aa21.27■■□□□ 1
SOX2-201ENST00000325404 MRPS9P82933 396 aaKnown RBP21.27■■□□□ 1
SOX2-201ENST00000325404 MAP2K1Q02750 393 aaPredicted RBP21.27■■□□□ 1
SOX2-201ENST00000325404 AUHQ13825 339 aaKnown RBP21.27■■□□□ 1
SOX2-201ENST00000325404 RNF207Q6ZRF8 634 aa21.27■■□□□ 1
SOX2-201ENST00000325404 TMEM161BQ8NDZ6 487 aa21.27■■□□□ 1
SOX2-201ENST00000325404 ZSWIM2Q8NEG5 633 aa21.27■■□□□ 1
SOX2-201ENST00000325404 TLDC2A0PJX2 215 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 CCT8L1PA6NM43 557 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 GCNT1Q02742 428 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 CAV1Q03135 178 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 CLEC16AQ2KHT3 1053 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 CBWD2Q8IUF1 395 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 MAGEC3Q8TD91 643 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 TCRBV7S2A1N4TA0A589 114 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 BACH1O14867 736 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 SLC1A1P43005 524 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 IFI35P80217 286 aaPredicted RBP21.26■□□□□ 0.99
SOX2-201ENST00000325404 KRT76Q01546 638 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 SPP2Q13103 211 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 SERPINB12Q96P63 405 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 SELENOSQ9BQE4 189 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 RAB20Q9NX57 234 aa21.26■□□□□ 0.99
SOX2-201ENST00000325404 NFIBO00712 420 aa21.25■□□□□ 0.99
SOX2-201ENST00000325404 MYBL1P10243 752 aa21.25■□□□□ 0.99
SOX2-201ENST00000325404 KCTD19Q17RG1 926 aaPredicted RBP21.25■□□□□ 0.99
SOX2-201ENST00000325404 RHBDF2Q6PJF5 856 aa21.25■□□□□ 0.99
SOX2-201ENST00000325404 ZNF677Q86XU0 584 aa21.25■□□□□ 0.99
SOX2-201ENST00000325404 SYTL5Q8TDW5 730 aaPredicted RBP21.25■□□□□ 0.99
SOX2-201ENST00000325404 TRIM11Q96F44 468 aa21.25■□□□□ 0.99
SOX2-201ENST00000325404 NSRP1Q9H0G5 558 aaKnown RBP21.25■□□□□ 0.99
SOX2-201ENST00000325404 WDR64B1ANS9 1081 aa21.25■□□□□ 0.99
SOX2-201ENST00000325404 ATMINO43313 823 aaPredicted RBP21.25■□□□□ 0.99
SOX2-201ENST00000325404 CNGA1P29973 690 aa21.25■□□□□ 0.99
SOX2-201ENST00000325404 PTP4A2Q12974 167 aa21.25■□□□□ 0.99
SOX2-201ENST00000325404 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.25■□□□□ 0.99
SOX2-201ENST00000325404 IPO4Q8TEX9 1081 aaKnown RBP21.25■□□□□ 0.99
SOX2-201ENST00000325404 FHDC1Q9C0D6 1143 aaPredicted RBP21.25■□□□□ 0.99
SOX2-201ENST00000325404 HOMER3Q9NSC5 361 aa21.25■□□□□ 0.99
SOX2-201ENST00000325404 GGA3Q9NZ52 723 aa21.25■□□□□ 0.99
SOX2-201ENST00000325404 PKD2L1Q9P0L9 805 aa21.25■□□□□ 0.99
SOX2-201ENST00000325404 ANKRD63C9JTQ0 380 aa21.24■□□□□ 0.99
SOX2-201ENST00000325404 ATP5DP30049 168 aa21.24■□□□□ 0.99
SOX2-201ENST00000325404 CCDC91Q7Z6B0 441 aa21.24■□□□□ 0.99
SOX2-201ENST00000325404 SCYL3Q8IZE3 742 aa21.24■□□□□ 0.99
SOX2-201ENST00000325404 FUKQ8N0W3 1084 aa21.24■□□□□ 0.99
SOX2-201ENST00000325404 GRK7Q8WTQ7 553 aa21.24■□□□□ 0.99
SOX2-201ENST00000325404 DHX38Q92620 1227 aaKnown RBP21.24■□□□□ 0.99
SOX2-201ENST00000325404 SGSM3Q96HU1 749 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms