RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 C1orf186Q6ZWK4 172 aa12.6□□□□□ -0.39
DDR1-223ENST00000324771 ARHGEF19Q8IW93 802 aa12.6□□□□□ -0.39
DDR1-223ENST00000324771 CCDC60Q8IWA6 550 aaPredicted RBP12.6□□□□□ -0.39
DDR1-223ENST00000324771 SRRM1Q8IYB3 904 aaKnown RBP12.6□□□□□ -0.39
DDR1-223ENST00000324771 OR6J1Q8NGC5 347 aa12.6□□□□□ -0.39
DDR1-223ENST00000324771 ETNPPLQ8TBG4 499 aa12.6□□□□□ -0.39
DDR1-223ENST00000324771 CLMNQ96JQ2 1002 aa12.6□□□□□ -0.39
DDR1-223ENST00000324771 MCEEQ96PE7 176 aa12.6□□□□□ -0.39
DDR1-223ENST00000324771 MKNK1Q9BUB5 465 aa12.6□□□□□ -0.39
DDR1-223ENST00000324771 SIK3Q9Y2K2 1263 aa12.6□□□□□ -0.39
DDR1-223ENST00000324771 IGSF9BQ9UPX0 1349 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 A8MXQ7 604 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 RNASELQ05823 741 aaKnown RBP12.59□□□□□ -0.39
DDR1-223ENST00000324771 PPP3CAQ08209 521 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 KIZQ2M2Z5 673 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 SLC5A5Q92911 643 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 FUT8Q9BYC5 575 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 PRRC2BQ5JSZ5 2229 aaKnown RBP12.59□□□□□ -0.39
DDR1-223ENST00000324771 BAZ2AQ9UIF9 1905 aaKnown RBP12.59□□□□□ -0.39
DDR1-223ENST00000324771 F8VZ95 297 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 SNHG28P0DPA3 235 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 DSG3P32926 999 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 GPS1Q13098 491 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 UGCGQ16739 394 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 GPRASP2Q96D09 838 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 CYFIP2Q96F07 1278 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 SPATC1LQ9H0A9 340 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 TMEM8AQ9HCN3 771 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 VIRMAQ69YN4 1812 aaKnown RBP12.59□□□□□ -0.39
DDR1-223ENST00000324771 MED7O43513 233 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 STK10O94804 968 aaKnown RBP12.59□□□□□ -0.39
DDR1-223ENST00000324771 H2AFXP16104 143 aaPredicted RBP12.59□□□□□ -0.39
DDR1-223ENST00000324771 VGLL4Q14135 290 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 KIAA1755Q5JYT7 1200 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 C1orf228Q6PIY5 440 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 FAM193BQ96PV7 902 aaPredicted RBP12.59□□□□□ -0.39
DDR1-223ENST00000324771 TACO1Q9BSH4 297 aaKnown RBP12.59□□□□□ -0.39
DDR1-223ENST00000324771 ANKZF1Q9H8Y5 726 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 KCND2Q9NZV8 630 aa12.59□□□□□ -0.39
DDR1-223ENST00000324771 TNPO2O14787 897 aaKnown RBP12.58□□□□□ -0.4
DDR1-223ENST00000324771 NKRFO15226 690 aaKnown RBP eCLIP12.58□□□□□ -0.4
DDR1-223ENST00000324771 CELF2O95319 508 aaKnown RBP12.58□□□□□ -0.4
DDR1-223ENST00000324771 GJB1P08034 283 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 SUPT20HL2P0C7V6 817 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 RRM1P23921 792 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 BEND6Q5SZJ8 279 aaPredicted RBP12.58□□□□□ -0.4
DDR1-223ENST00000324771 ATF7IP2Q5U623 682 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 GPAT2Q6NUI2 795 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 TLR10Q9BXR5 811 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 OLFML3Q9NRN5 406 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 TAS2R14Q9NYV8 317 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 GRID2IPA4D2P6 1211 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 DDX3XO00571 662 aaKnown RBP eCLIP12.58□□□□□ -0.45e-7■■■■■ 37.9
DDR1-223ENST00000324771 SLC4A1P02730 911 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 ALDH3A1P30838 453 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 SNAPC2Q13487 334 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 CUL1Q13616 776 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 KCNT1Q5JUK3 1230 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 ALS2CLQ60I27 953 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 TMEM139Q8IV31 216 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 USP38Q8NB14 1042 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 C1orf131Q8NDD1 294 aaKnown RBP12.58□□□□□ -0.4
DDR1-223ENST00000324771 NLGN2Q8NFZ4 835 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 RANBP17Q9H2T7 1088 aaKnown RBP12.58□□□□□ -0.4
DDR1-223ENST00000324771 REXO2Q9Y3B8 237 aaKnown RBP12.58□□□□□ -0.4
DDR1-223ENST00000324771 SCINQ9Y6U3 715 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 PPFIA4O75335 1185 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 GLI1P08151 1106 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 KRT17Q04695 432 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 ITGB3BPQ13352 177 aaPredicted RBP12.58□□□□□ -0.4
DDR1-223ENST00000324771 GEN1Q17RS7 908 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 FIGNQ5HY92 759 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 CFAP157Q5JU67 520 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 SIX6OS1Q8N1H7 587 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 AFG1LQ8WV93 481 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 OPTNQ96CV9 577 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 CCDC97Q96F63 343 aaPredicted RBP12.58□□□□□ -0.4
DDR1-223ENST00000324771 CFAP36Q96G28 342 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 HSD17B14Q9BPX1 270 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 SMARCAD1Q9H4L7 1026 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 COL20A1Q9P218 1284 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 GGT7Q9UJ14 662 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 TRAF3IP3Q9Y228 551 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 RRP15Q9Y3B9 282 aaKnown RBP12.58□□□□□ -0.4
DDR1-223ENST00000324771 ADAMTSL3P82987 1691 aa12.58□□□□□ -0.4
DDR1-223ENST00000324771 CLTAP09496 248 aa12.57□□□□□ -0.4
DDR1-223ENST00000324771 ZNF286BP0CG31 522 aa12.57□□□□□ -0.4
DDR1-223ENST00000324771 KRT3P12035 628 aa12.57□□□□□ -0.4
DDR1-223ENST00000324771 LCP1P13796 627 aa12.57□□□□□ -0.4
DDR1-223ENST00000324771 CA4P22748 312 aa12.57□□□□□ -0.4
DDR1-223ENST00000324771 ZNF157P51786 506 aaPredicted RBP12.57□□□□□ -0.4
DDR1-223ENST00000324771 GLE1Q53GS7 698 aaKnown RBP12.57□□□□□ -0.4
DDR1-223ENST00000324771 AADACL2Q6P093 401 aa12.57□□□□□ -0.4
DDR1-223ENST00000324771 SCFD2Q8WU76 684 aa12.57□□□□□ -0.4
DDR1-223ENST00000324771 RILPQ96NA2 401 aa12.57□□□□□ -0.4
DDR1-223ENST00000324771 RUNDC3BQ96NL0 473 aa12.57□□□□□ -0.4
DDR1-223ENST00000324771 FHDC1Q9C0D6 1143 aaPredicted RBP12.57□□□□□ -0.4
DDR1-223ENST00000324771 CREB3O43889 395 aa12.57□□□□□ -0.4
DDR1-223ENST00000324771 SASH3O75995 380 aa12.57□□□□□ -0.4
DDR1-223ENST00000324771 ZBED1O96006 694 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms