RNA–Protein interactions for RNA: ENST00000321374.9

CCDC33-202, Transcript of coiled-coil domain containing 33, humanhuman

TSL 2

Gene CCDC33, Length 1,450 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-202ENST00000321374 SYT10Q6XYQ8 523 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 NELFCDQ8IXH7 590 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 ZC3H3Q8IXZ2 948 aaKnown RBP12.82□□□□□ -0.36
CCDC33-202ENST00000321374 GLIS3Q8NEA6 775 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 RPGRIP1Q96KN7 1286 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 DNAJC7Q99615 494 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 RUSC1Q9BVN2 902 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 TLE6Q9H808 572 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 OLFML3Q9NRN5 406 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 KCNH7Q9NS40 1196 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 LRFN2Q9ULH4 789 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 ODF2LQ9ULJ1 636 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 TRPC6Q9Y210 931 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 PCDHGC5Q9Y5F6 944 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 ADGRG1Q9Y653 693 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 UBE4BO95155 1302 aa12.82□□□□□ -0.36
CCDC33-202ENST00000321374 ARHGEF35A5YM69 484 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 PDXKO00764 312 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 EIF3DO15371 548 aaKnown RBP eCLIP12.81□□□□□ -0.36
CCDC33-202ENST00000321374 P4HBP07237 508 aaKnown RBP12.81□□□□□ -0.36
CCDC33-202ENST00000321374 ATF7P17544 494 aaPredicted RBP12.81□□□□□ -0.36
CCDC33-202ENST00000321374 RPL13P26373 211 aaKnown RBP12.81□□□□□ -0.36
CCDC33-202ENST00000321374 GATMP50440 423 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 JAK3P52333 1124 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 MARSP56192 900 aaKnown RBP12.81□□□□□ -0.36
CCDC33-202ENST00000321374 UBE3AQ05086 875 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 PPP2R3AQ06190 1150 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 KNOP1Q1ED39 458 aaKnown RBP12.81□□□□□ -0.36
CCDC33-202ENST00000321374 RAD9BQ6WBX8 426 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 EPM2AIP1Q7L775 607 aaPredicted RBP12.81□□□□□ -0.36
CCDC33-202ENST00000321374 MICAL1Q8TDZ2 1067 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 LXNQ9BS40 222 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 EDEM3Q9BZQ6 932 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 KCTD10Q9H3F6 313 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 AZI2Q9H6S1 392 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 ZSWIM4Q9H7M6 989 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 MRPL44Q9H9J2 332 aaKnown RBP12.81□□□□□ -0.36
CCDC33-202ENST00000321374 JPH1Q9HDC5 661 aaPredicted RBP12.81□□□□□ -0.36
CCDC33-202ENST00000321374 TLR9Q9NR96 1032 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 TRAF3IP3Q9Y228 551 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 PCDHB12Q9Y5F1 795 aa12.81□□□□□ -0.36
CCDC33-202ENST00000321374 PER2O15055 1255 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 MAFGO15525 162 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 IBSPP21815 317 aaPredicted RBP12.8□□□□□ -0.36
CCDC33-202ENST00000321374 GUCY2CP25092 1073 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 SFNP31947 248 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 KRT76Q01546 638 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 SPOUT1Q5T280 376 aaKnown RBP12.8□□□□□ -0.36
CCDC33-202ENST00000321374 C1orf186Q6ZWK4 172 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 RDM1Q8NG50 284 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 PIGOQ8TEQ8 1089 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 ASIC4Q96FT7 647 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 EEF2KMTQ96G04 330 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 PCYT2Q99447 389 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 CDCA3Q99618 268 aaPredicted RBP12.8□□□□□ -0.36
CCDC33-202ENST00000321374 DESI2Q9BSY9 194 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 CELF4Q9BZC1 486 aaKnown RBP12.8□□□□□ -0.36
CCDC33-202ENST00000321374 TTYH3Q9C0H2 523 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 PARVGQ9HBI0 331 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 AAASQ9NRG9 546 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 TYW1Q9NV66 732 aaKnown RBP12.8□□□□□ -0.36
CCDC33-202ENST00000321374 DNAI1Q9UI46 699 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 FAM186AA6NE01 2351 aa12.8□□□□□ -0.36
CCDC33-202ENST00000321374 DDX39AO00148 427 aaKnown RBP12.79□□□□□ -0.36
CCDC33-202ENST00000321374 CTIFO43310 598 aaKnown RBP12.79□□□□□ -0.36
CCDC33-202ENST00000321374 GFRA3O60609 400 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 LYPLA2O95372 231 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 GCNT3O95395 438 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 CASQ1P31415 396 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 CYLC1P35663 651 aaPredicted RBP12.79□□□□□ -0.36
CCDC33-202ENST00000321374 VCPP55072 806 aaKnown RBP12.79□□□□□ -0.36
CCDC33-202ENST00000321374 RBM10P98175 930 aaKnown RBP12.79□□□□□ -0.36
CCDC33-202ENST00000321374 CDK17Q00537 523 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 ADAM9Q13443 819 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 MTF1Q14872 753 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 TRIM65Q6PJ69 517 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 MYCT1Q8N699 235 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 NEK11Q8NG66 645 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 ATP8B4Q8TF62 1192 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 TRAPPC12Q8WVT3 735 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 SUSD6Q92537 303 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 CCDC43Q96MW1 224 aaKnown RBP12.79□□□□□ -0.36
CCDC33-202ENST00000321374 FGFBP2Q9BYJ0 223 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 IRF2BPLQ9H1B7 796 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 FAM86C1Q9NVL1 165 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 SLC9A2Q9UBY0 812 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 DBR1Q9UK59 544 aaKnown RBP12.79□□□□□ -0.36
CCDC33-202ENST00000321374 SAMM50Q9Y512 469 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 PCDHB7Q9Y5E2 793 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC33-202ENST00000321374 VPS13AQ96RL7 3174 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 DMDP11532 3685 aa12.79□□□□□ -0.36
CCDC33-202ENST00000321374 SMIM35A0A1B0GVV1 85 aa12.78□□□□□ -0.36
CCDC33-202ENST00000321374 RNF225M0QZC1 329 aaPredicted RBP12.78□□□□□ -0.36
CCDC33-202ENST00000321374 SLC16A3O15427 465 aaKnown RBP12.78□□□□□ -0.36
CCDC33-202ENST00000321374 DHX15O43143 795 aaKnown RBP12.78□□□□□ -0.36
CCDC33-202ENST00000321374 KIF5CO60282 957 aa12.78□□□□□ -0.36
CCDC33-202ENST00000321374 DKC1O60832 514 aaKnown RBP eCLIP12.78□□□□□ -0.36
CCDC33-202ENST00000321374 FGF18O76093 207 aa12.78□□□□□ -0.36
CCDC33-202ENST00000321374 IPO7O95373 1038 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms