RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 UHMK1Q8TAS1 419 aaKnown RBP9.32□□□□□ -0.92
CLK1-201ENST00000321356 MFSD14AQ96MC6 490 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 AGBL1Q96MI9 1066 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 NT5C1BQ96P26 610 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 MYCBPQ99417 103 aaPredicted RBP9.32□□□□□ -0.92
CLK1-201ENST00000321356 PLVAPQ9BX97 442 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 AVENQ9NQS1 362 aaPredicted RBP9.32□□□□□ -0.92
CLK1-201ENST00000321356 TBC1D22BQ9NU19 505 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 TMOD2Q9NZR1 351 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 PKD2L1Q9P0L9 805 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 SAMD15Q9P1V8 674 aa9.32□□□□□ -0.92
CLK1-201ENST00000321356 TPX2Q9ULW0 747 aaKnown RBP9.32□□□□□ -0.92
CLK1-201ENST00000321356 WDR81Q562E7 1941 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 NFIBO00712 420 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 SNX3O60493 162 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 DLATP10515 647 aaKnown RBP9.31□□□□□ -0.92
CLK1-201ENST00000321356 CNGA1P29973 690 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 MAN1A1P33908 653 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 CAP2P40123 477 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 PPP1R7Q15435 360 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 NBPF9Q3BBW0 867 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 VSTM1Q6UX27 236 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 NSMFQ6X4W1 530 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 TRPM8Q7Z2W7 1104 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 FBXL13Q8NEE6 735 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 TAS1R2Q8TE23 839 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 POP1Q99575 1024 aaKnown RBP9.31□□□□□ -0.92
CLK1-201ENST00000321356 ELAC2Q9BQ52 826 aaKnown RBP9.31□□□□□ -0.92
CLK1-201ENST00000321356 DDX23Q9BUQ8 820 aaKnown RBP9.31□□□□□ -0.92
CLK1-201ENST00000321356 NSRP1Q9H0G5 558 aaKnown RBP9.31□□□□□ -0.92
CLK1-201ENST00000321356 GPRC5CQ9NQ84 441 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 HOMER3Q9NSC5 361 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 ANKEF1Q9NU02 776 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.31□□□□□ -0.92
CLK1-201ENST00000321356 ZNF70Q9UC06 446 aaPredicted RBP9.31□□□□□ -0.92
CLK1-201ENST00000321356 CCPG1Q9ULG6 757 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 TBX20Q9UMR3 447 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 EXOC7Q9UPT5 735 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 ARID2Q68CP9 1835 aa9.31□□□□□ -0.92
CLK1-201ENST00000321356 CLRN2A0PK11 232 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 TMEM150BA6NC51 233 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 H0YIN7 160 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 TTC4O95801 387 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 VIMP08670 466 aaKnown RBP9.3□□□□□ -0.92
CLK1-201ENST00000321356 UNGP13051 313 aaPredicted RBP9.3□□□□□ -0.92
CLK1-201ENST00000321356 RDXP35241 583 aaKnown RBP9.3□□□□□ -0.92
CLK1-201ENST00000321356 MAP2K2P36507 400 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 NPTX2P47972 431 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 ELF3P78545 371 aaPredicted RBP9.3□□□□□ -0.92
CLK1-201ENST00000321356 GCNT1Q02742 428 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 CAV1Q03135 178 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 PTP4A2Q12974 167 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 MTMR1Q13613 665 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 ZYXQ15942 572 aaKnown RBP9.3□□□□□ -0.92
CLK1-201ENST00000321356 LONRF1Q17RB8 773 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 MEX3CQ5U5Q3 659 aaKnown RBP9.3□□□□□ -0.92
CLK1-201ENST00000321356 FKBP1CQ5VVH2 108 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 SLC39A4Q6P5W5 647 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 ENOSF1Q7L5Y1 443 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 CCDC25Q86WR0 208 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 MCF2L2Q86YR7 1114 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 MAIP1Q8WWC4 291 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 C1orf54Q8WWF1 131 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 DHX38Q92620 1227 aaKnown RBP9.3□□□□□ -0.92
CLK1-201ENST00000321356 KIFAP3Q92845 792 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 SAAL1Q96ER3 474 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 SNF8Q96H20 258 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 FAM81BQ96LP2 452 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 GMLQ99445 158 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 NTPCRQ9BSD7 190 aaKnown RBP9.3□□□□□ -0.92
CLK1-201ENST00000321356 HERPUD2Q9BSE4 406 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 GLIS2Q9BZE0 524 aaPredicted RBP9.3□□□□□ -0.92
CLK1-201ENST00000321356 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.3□□□□□ -0.922e-7■■■■■ 64.8
CLK1-201ENST00000321356 TOPORSQ9NS56 1045 aaPredicted RBP9.3□□□□□ -0.92
CLK1-201ENST00000321356 RAB20Q9NX57 234 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 NEU2Q9Y3R4 380 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 MROH7Q68CQ1 1323 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 SORBS3O60504 671 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 ATP2C2O75185 946 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 CCNE2O96020 404 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 CHKAP35790 457 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 IFNAR2P48551 515 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 JAK3P52333 1124 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 PSMC5P62195 406 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 IRX3P78415 501 aaPredicted RBP9.3□□□□□ -0.92
CLK1-201ENST00000321356 CYP24A1Q07973 514 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 RIPK1Q13546 671 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 SPDYE2Q495Y8 402 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 CCDC38Q502W7 563 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 SV2AQ7L0J3 742 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.3□□□□□ -0.92
CLK1-201ENST00000321356 CDAN1Q8IWY9 1227 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 MCOLN2Q8IZK6 566 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 FLAD1Q8NFF5 587 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 SYTL5Q8TDW5 730 aaPredicted RBP9.3□□□□□ -0.92
CLK1-201ENST00000321356 GRK7Q8WTQ7 553 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 SPIRE2Q8WWL2 714 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 ARHGEF2Q92974 986 aaKnown RBP9.3□□□□□ -0.92
CLK1-201ENST00000321356 CCDC127Q96BQ5 260 aa9.3□□□□□ -0.92
CLK1-201ENST00000321356 DDX27Q96GQ7 796 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms