RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 JMJD4Q9H9V9 463 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 TUFT1Q9NNX1 390 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 GGT7Q9UJ14 662 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 SORCS3Q9UPU3 1222 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 SIPA1L3O60292 1781 aaPredicted RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ASTN1O14525 1302 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 H0Y3Z8 333 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 FOXN3O00409 490 aaPredicted RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 PSMC4P43686 418 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 KLHL38Q2WGJ6 581 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 MAP3K21Q5TCX8 1036 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 LIN9Q5TKA1 542 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 CLNKQ7Z7G1 428 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 KRT35Q92764 455 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 UTP4Q969X6 686 aaKnown RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 FAM136AQ96C01 138 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 PPP1R14BQ96C90 147 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 NACC1Q96RE7 527 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 IRAK4Q9NWZ3 460 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ATF5Q9Y2D1 282 aaPredicted RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 TGFB1I1O43294 461 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 FKBP6O75344 327 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 PSMG1O95456 288 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 MAGEA4P43358 317 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 CRKLP46109 303 aaKnown RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 MXI1P50539 228 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 WDR4P57081 412 aaKnown RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 CACNB1Q02641 598 aaPredicted RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 MCL1Q07820 350 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 MPP2Q14168 576 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ARHGAP44Q17R89 818 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 Q4G0T1 1027 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 WDR78Q5VTH9 848 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 DCAF12L1Q5VU92 463 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ZNF449Q6P9G9 518 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 CENPUQ71F23 418 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 SCYL3Q8IZE3 742 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 MYCT1Q8N699 235 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 APBB2Q92870 758 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 BORCS6Q96GS4 357 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 HAO1Q9UJM8 370 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 SHOC2Q9UQ13 582 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 COL5A2P05997 1499 aaPredicted RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 TM9SF1O15321 606 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 PYGMP11217 842 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ESRRAP11474 423 aaPredicted RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 RPL26P61254 145 aaKnown RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 OTUD6AQ7L8S5 288 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ZCCHC9Q8N567 271 aaKnown RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 CD101Q93033 1021 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 MTFR1LQ9H019 292 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 FAM96AQ9H5X1 160 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 EHMT1Q9H9B1 1298 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 NMRK1Q9NWW6 199 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 CHCHD3Q9NX63 227 aaKnown RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 PSMC3IPQ9P2W1 217 aaPredicted RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 PDHA1P08559 390 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 ARSHQ5FYA8 562 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 IZUMO3Q5VZ72 239 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 AAGABQ6PD74 315 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 ZC3H18Q86VM9 953 aaKnown RBP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 CATSPER3Q86XQ3 398 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 SYCP3Q8IZU3 236 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 PROCA1Q8NCQ7 364 aaPredicted RBP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 TMEM174Q8WUU8 243 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 CELF1Q92879 486 aaKnown RBP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 EPB41L1Q9H4G0 881 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 NDE1Q9NXR1 346 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 COG5Q9UP83 839 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 LTN1O94822 1766 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 TTC36A6NLP5 189 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 ENTPD5O75356 428 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 MED24O75448 989 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 IVDP26440 423 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 SERPINB4P48594 390 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 CDK18Q07002 472 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 DNAJC3Q13217 504 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 TMED2Q15363 201 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 CIAPIN1Q6FI81 312 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 DRICH1Q6PGQ1 229 aaPredicted RBP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 TMPRSS6Q8IU80 811 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 NCSTNQ92542 709 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 RBM41Q96IZ5 413 aaKnown RBP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 OSBPL8Q9BZF1 889 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 WDR11Q9BZH6 1224 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 EURLQ9NYK6 297 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 CIDEBQ9UHD4 219 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 EXOC7Q9UPT5 735 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 ALOX15BO15296 676 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 HLA-DOAP06340 250 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 MAPTP10636 758 aaKnown RBP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 EPHB2P29323 1055 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 COPB2P35606 906 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 BTDP43251 543 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 SLC12A3P55017 1021 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 AP1B1Q10567 949 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 EAPPQ56P03 285 aaPredicted RBP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 LCA5Q86VQ0 697 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 ZNF677Q86XU0 584 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms