RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 NRCAMQ92823 1304 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 A0A087X0B3 334 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 C17orf102A2RUQ5 167 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 SART1O43290 800 aaKnown RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 SPOPO43791 374 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 DLATP10515 647 aaKnown RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 ZFXP17010 805 aaPredicted RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 ADORA2AP29274 412 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 NMT1P30419 496 aaKnown RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 EIF4A3P38919 411 aaKnown RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 NPTX2P47972 431 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 RBP5P82980 135 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 MTMR3Q13615 1198 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 COL9A3Q14050 684 aaPredicted RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 CFAP58Q5T655 872 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 NOTUMQ6P988 496 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 MPZL3Q6UWV2 235 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 ZNF365Q70YC5 407 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 PDZD4Q76G19 769 aaPredicted RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 TMEM35BQ8NCS4 154 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 PHC3Q8NDX5 983 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 REPS2Q8NFH8 660 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 TBC1D31Q96DN5 1066 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 TSC22D3Q99576 134 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 CGRRF1Q99675 332 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 FAM129AQ9BZQ8 928 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 SEMA6BQ9H3T3 888 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 UBE2TQ9NPD8 197 aaPredicted RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 MAFBQ9Y5Q3 323 aaPredicted RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 ZNF536O15090 1300 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 KIF13BQ9NQT8 1826 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 TTC26A0AVF1 554 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 ADCY3O60266 1144 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 MYBP10242 640 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 KCNA2P16389 499 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 UBA1P22314 1058 aaKnown RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 CTNNA2P26232 953 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 CNGA1P29973 690 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 HNRNPH3P31942 346 aaKnown RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 CACNB1Q02641 598 aaPredicted RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 ARID5AQ03989 594 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 PTPN11Q06124 597 aaPredicted RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 ACVR2BQ13705 512 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 SLC18A3Q16572 532 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 PRAMEF18Q5VWM3 479 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 SLC30A9Q6PML9 568 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 BTN2A1Q7KYR7 527 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 TRMT1LQ7Z2T5 733 aaKnown RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 CCDC50Q8IVM0 306 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 ANKRD13CQ8N6S4 541 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 ACAP3Q96P50 834 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 CCDC77Q9BR77 488 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 NTPCRQ9BSD7 190 aaKnown RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 PCDHB4Q9Y5E5 795 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 TAF1P21675 1872 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 TMEM88BA6NKF7 163 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 CHUKO15111 745 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 HOXA2O43364 376 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 LGR5O75473 907 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 PARNO95453 639 aaKnown RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 MYBL2P10244 700 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 HARSP12081 509 aaKnown RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 CD44P16070 742 aaKnown RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 PRLRP16471 622 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 CCZ1BP86790 482 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 CCZ1P86791 482 aaPredicted RBP6.41□□□□□ -1.38
SEC22A-201ENST00000309934 EVX2Q03828 476 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 PSMD6Q15008 389 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 ELF2Q15723 593 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 DUSP28Q4G0W2 176 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 ATF7IP2Q5U623 682 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 KLHDC7AQ5VTJ3 777 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 TC2NQ8N9U0 490 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 TMEM174Q8WUU8 243 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 CCDC127Q96BQ5 260 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 HAUS1Q96CS2 278 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 PLEKHA5Q9HAU0 1116 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 AIPL1Q9NZN9 384 aa6.41□□□□□ -1.38
SEC22A-201ENST00000309934 LRRC53A6NM62 1247 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 ACKR2O00590 384 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 CA12O43570 354 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 BUB1BO60566 1050 aaPredicted RBP6.4□□□□□ -1.38
SEC22A-201ENST00000309934 RTN2O75298 545 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 GZMAP12544 262 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 UCHL3P15374 230 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 ARHGAP25P42331 645 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 GCNT1Q02742 428 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 ARHGAP44Q17R89 818 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 CCDC144BQ3MJ40 725 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 MAP1SQ66K74 1059 aaPredicted RBP6.4□□□□□ -1.38
SEC22A-201ENST00000309934 ALKBH5Q6P6C2 394 aaKnown RBP6.4□□□□□ -1.38
SEC22A-201ENST00000309934 GPR142Q7Z601 462 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 RHPN2Q8IUC4 686 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 MAP7D3Q8IWC1 876 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 RNF149Q8NC42 400 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 URGCPQ8TCY9 931 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 EMID1Q96A84 441 aaPredicted RBP6.4□□□□□ -1.38
SEC22A-201ENST00000309934 LENG9Q96B70 501 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 DUSP9Q99956 384 aaKnown RBP6.4□□□□□ -1.38
SEC22A-201ENST00000309934 PDGFDQ9GZP0 370 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms