RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 AFG3L2Q9Y4W6 797 aa17.31■□□□□ 0.36
LONRF3-201ENST00000304778 SMIM23A6NLE4 172 aa17.31■□□□□ 0.36
LONRF3-201ENST00000304778 PPFIA2O75334 1257 aa17.31■□□□□ 0.36
LONRF3-201ENST00000304778 DR1Q01658 176 aa17.31■□□□□ 0.36
LONRF3-201ENST00000304778 PALB2Q86YC2 1186 aa17.31■□□□□ 0.36
LONRF3-201ENST00000304778 TXLNGYQ9BZA5 131 aa17.31■□□□□ 0.36
LONRF3-201ENST00000304778 TAS2R14Q9NYV8 317 aa17.31■□□□□ 0.36
LONRF3-201ENST00000304778 LARSQ9P2J5 1176 aaKnown RBP17.31■□□□□ 0.36
LONRF3-201ENST00000304778 TCEAL9Q9UHQ7 104 aa17.31■□□□□ 0.36
LONRF3-201ENST00000304778 PAEPP09466 180 aa17.31■□□□□ 0.36
LONRF3-201ENST00000304778 PSMC5P62195 406 aa17.31■□□□□ 0.36
LONRF3-201ENST00000304778 KRT71Q3SY84 523 aa17.31■□□□□ 0.36
LONRF3-201ENST00000304778 SLC9A9Q8IVB4 645 aa17.31■□□□□ 0.36
LONRF3-201ENST00000304778 C4orf19Q8IY42 314 aa17.31■□□□□ 0.36
LONRF3-201ENST00000304778 SEPT11Q9NVA2 429 aaKnown RBP17.31■□□□□ 0.36
LONRF3-201ENST00000304778 PPP2R3BQ9Y5P8 575 aa17.31■□□□□ 0.36
LONRF3-201ENST00000304778 WDR64B1ANS9 1081 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 JAK3P52333 1124 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 KRT76Q01546 638 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 CLUL1Q15846 466 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 ARHGAP44Q17R89 818 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 SUPT20HL1Q3ZLR7 823 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 PHLDB3Q6NSJ2 640 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 UHMK1Q8TAS1 419 aaKnown RBP17.3■□□□□ 0.36
LONRF3-201ENST00000304778 COG5Q9UP83 839 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 C5orf60A6NFR6 353 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 USP2O75604 605 aaPredicted RBP17.3■□□□□ 0.36
LONRF3-201ENST00000304778 HADHBP55084 474 aaKnown RBP17.3■□□□□ 0.36
LONRF3-201ENST00000304778 EIF3BP55884 814 aaKnown RBP17.3■□□□□ 0.36
LONRF3-201ENST00000304778 RWDD2BP57060 319 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 NOL9Q5SY16 702 aaKnown RBP17.3■□□□□ 0.36
LONRF3-201ENST00000304778 PLA2G4FQ68DD2 849 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 DUPD1Q68J44 220 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 XRRA1Q6P2D8 792 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 RHOT2Q8IXI1 618 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.3■□□□□ 0.36
LONRF3-201ENST00000304778 KDM4CQ9H3R0 1056 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 ERVK-5Q9HDB9 667 aa17.3■□□□□ 0.36
LONRF3-201ENST00000304778 EXOC3O60645 756 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 LRRN2O75325 713 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 PLS3P13797 630 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 SFNP31947 248 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 SNX1Q13596 522 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 LMO3Q8TAP4 145 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 NSUN6Q8TEA1 469 aaKnown RBP17.29■□□□□ 0.36
LONRF3-201ENST00000304778 ALG3Q92685 438 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 ERP44Q9BS26 406 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 TEX13BQ9BXU2 312 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 SPON1Q9HCB6 807 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 GPRC5CQ9NQ84 441 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 CPSF2Q9P2I0 782 aaKnown RBP17.29■□□□□ 0.36
LONRF3-201ENST00000304778 ATP8A1Q9Y2Q0 1164 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 FAM187AA6NFU0 413 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 SNUPNO95149 360 aaKnown RBP17.29■□□□□ 0.36
LONRF3-201ENST00000304778 DHX34Q14147 1143 aaKnown RBP17.29■□□□□ 0.36
LONRF3-201ENST00000304778 RBBP5Q15291 538 aaKnown RBP17.29■□□□□ 0.36
LONRF3-201ENST00000304778 THEMIS2Q5TEJ8 643 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 MIS18BP1Q6P0N0 1132 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 NLRX1Q86UT6 975 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 TAX1BP1Q86VP1 789 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 RDH13Q8NBN7 331 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 GPRASP2Q96D09 838 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 AGPAT1Q99943 283 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 FHDC1Q9C0D6 1143 aaPredicted RBP17.29■□□□□ 0.36
LONRF3-201ENST00000304778 YIPF3Q9GZM5 350 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 ZDHHC18Q9NUE0 388 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 CYP39A1Q9NYL5 469 aa17.29■□□□□ 0.36
LONRF3-201ENST00000304778 SPDYE16A6NNV3 312 aaPredicted RBP17.28■□□□□ 0.36
LONRF3-201ENST00000304778 TISP43B9A030 160 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 FOXN3O00409 490 aaPredicted RBP17.28■□□□□ 0.36
LONRF3-201ENST00000304778 RGS20O76081 388 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 GHRP10912 638 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 ZNF211Q13398 564 aaPredicted RBP17.28■□□□□ 0.36
LONRF3-201ENST00000304778 XKR9Q5GH70 373 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 CCDC63Q8NA47 563 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 ZNF570Q96NI8 536 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 SYNGAP1Q96PV0 1343 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 ATP2A1O14983 1001 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 SMNDC1O75940 238 aaKnown RBP eCLIP17.28■□□□□ 0.36
LONRF3-201ENST00000304778 DDNO94850 711 aaPredicted RBP17.28■□□□□ 0.36
LONRF3-201ENST00000304778 MYBPC2Q14324 1141 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 C11orf63Q6NUN7 778 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 P3H4Q92791 437 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 MOV10L1Q9BXT6 1211 aaKnown RBP17.28■□□□□ 0.36
LONRF3-201ENST00000304778 PCIF1Q9H4Z3 704 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 ACAD9Q9H845 621 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 HOXC10Q9NYD6 342 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.28■□□□□ 0.36
LONRF3-201ENST00000304778 MAPTP10636 758 aaKnown RBP17.28■□□□□ 0.36
LONRF3-201ENST00000304778 CRELD2Q6UXH1 353 aaPredicted RBP17.28■□□□□ 0.36
LONRF3-201ENST00000304778 TBC1D1Q86TI0 1168 aaPredicted RBP17.28■□□□□ 0.36
LONRF3-201ENST00000304778 TLCD1Q96CP7 247 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.28■□□□□ 0.36
LONRF3-201ENST00000304778 TELO2Q9Y4R8 837 aa17.28■□□□□ 0.36
LONRF3-201ENST00000304778 SHBGP04278 402 aa17.27■□□□□ 0.36
LONRF3-201ENST00000304778 KRT13P13646 458 aa17.27■□□□□ 0.36
LONRF3-201ENST00000304778 ZNF746Q6NUN9 644 aaPredicted RBP17.27■□□□□ 0.36
LONRF3-201ENST00000304778 JAMLQ86YT9 394 aa17.27■□□□□ 0.36
LONRF3-201ENST00000304778 SLC20A1Q8WUM9 679 aa17.27■□□□□ 0.36
LONRF3-201ENST00000304778 PCDHA10Q9Y5I2 948 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms