RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 C4BPAP04003 597 aaKnown RBP16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 MCF2P10911 925 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 TNFSF9P41273 254 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 NCBP1Q09161 790 aaKnown RBP16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 PCBP1Q15365 356 aaKnown RBP eCLIP16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 AMHR2Q16671 573 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 KYAT1Q16773 422 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 ENOSF1Q7L5Y1 443 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 ZNF571Q7Z3V5 609 aaPredicted RBP16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 ZNF710Q8N1W2 664 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 MTG1Q9BT17 334 aaPredicted RBP16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 UPF3AQ9H1J1 476 aaKnown RBP16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 CDT1Q9H211 546 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 C1orf112Q9NSG2 853 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 PCNTO95613 3336 aa16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 A0A087X0T9 212 aa16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 LRRN2O75325 713 aa16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 FAM228BP0C875 321 aa16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 PIK3CAP42336 1068 aa16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 WNT7BP56706 349 aa16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 ADAM17P78536 824 aa16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 CACNB2Q08289 660 aaPredicted RBP16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 BMS1Q14692 1282 aaKnown RBP16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 TDRD10Q5VZ19 366 aaKnown RBP16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 EEF1DP3Q658K8 133 aa16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 LMBRD2Q68DH5 695 aaPredicted RBP16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 THNSL1Q8IYQ7 743 aa16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 MYRIPQ8NFW9 859 aa16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 LACRTQ9GZZ8 138 aa16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 TSKSQ9UJT2 592 aa16.96■□□□□ 0.31
HERPUD1-201ENST00000300302 FOXN3O00409 490 aaPredicted RBP16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 RIOK3O14730 519 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 PHACTR2O75167 634 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 CSDE1O75534 798 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 ABL1P00519 1130 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 PNMA6AP0CW24 399 aaPredicted RBP16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 NKX3-2P78367 333 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 POU5F1Q01860 360 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 GCNT1Q02742 428 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 KIZQ2M2Z5 673 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 APBB1IPQ7Z5R6 666 aaPredicted RBP16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 ADPGKQ9BRR6 497 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 ADAMTS10Q9H324 1103 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 PDZD7Q9H5P4 517 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 TRIM10Q9UDY6 481 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 SRRDQ9UH36 339 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 PTPRJQ12913 1337 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 RCCD1A6NED2 376 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 PJA2O43164 708 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 TSPAN1O60635 241 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 IL18RAPO95256 599 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 GNRH1P01148 92 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 HLA-DRAP01903 254 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 ARF4P18085 180 aaPredicted RBP16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 TRIM32Q13049 653 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 HELQQ8TDG4 1101 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 SECISBP2LQ93073 1101 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 FAM212AQ96EL1 285 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 RPF1Q9H9Y2 349 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 HDAC6Q9UBN7 1215 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 TFR2Q9UP52 801 aa16.95■□□□□ 0.3
HERPUD1-201ENST00000300302 MYADML2A6NDP7 307 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 GPR32O75388 356 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 PGK1P00558 417 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 CLTAP09496 248 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 PRKAR2AP13861 404 aaKnown RBP16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 HSPA6P17066 643 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 DUOXA2Q1HG44 320 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 RUFY4Q6ZNE9 571 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 CDR2LQ86X02 465 aaPredicted RBP16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 SLC35F6Q8N357 371 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 NME8Q8N427 588 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 SHC3Q92529 594 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 CPB2Q96IY4 423 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 IMPG2Q9BZV3 1241 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 XPNPEP3Q9NQH7 507 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.94■□□□□ 0.33e-6■■■■■ 91.3
HERPUD1-201ENST00000300302 NAGPAQ9UK23 515 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 GINS2Q9Y248 185 aa16.94■□□□□ 0.3
HERPUD1-201ENST00000300302 THSD7BQ9C0I4 1608 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 A0A1B0GUA9 196 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 CTAGE9A4FU28 777 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 TREHO43280 583 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 B4GALT4O60513 344 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 URI1O94763 535 aaPredicted RBP16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 HMGCRP04035 888 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 ELNP15502 786 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 HOXC8P31273 242 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 USP8P40818 1118 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 OSTNP61366 133 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 TMEM62Q0P6H9 643 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 NAB2Q15742 525 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 FAM71AQ8IYT1 594 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 OR5B17Q8NGF7 314 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 PPP1R13LQ8WUF5 828 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 ZNF296Q8WUU4 475 aaPredicted RBP16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 DNAJB3Q8WWF6 145 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 KREMEN1Q96MU8 473 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 PI4K2AQ9BTU6 479 aa16.93■□□□□ 0.3
HERPUD1-201ENST00000300302 ATP8B3O60423 1300 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms