RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 SLC20A1Q8WUM9 679 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 SCG3Q8WXD2 468 aaKnown RBP15.84■□□□□ 0.13
SPIDR-201ENST00000297423 SYN2Q92777 582 aaPredicted RBP15.84■□□□□ 0.13
SPIDR-201ENST00000297423 SAYSD1Q9NPB0 183 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 KRT36O76013 467 aa15.83■□□□□ 0.13
SPIDR-201ENST00000297423 CHKAP35790 457 aa15.83■□□□□ 0.13
SPIDR-201ENST00000297423 ICA1Q05084 483 aa15.83■□□□□ 0.13
SPIDR-201ENST00000297423 TMED1Q13445 227 aa15.83■□□□□ 0.13
SPIDR-201ENST00000297423 PDCD2Q16342 344 aaPredicted RBP15.83■□□□□ 0.13
SPIDR-201ENST00000297423 DACT2Q5SW24 774 aa15.83■□□□□ 0.13
SPIDR-201ENST00000297423 OLFML2BQ68BL8 750 aa15.83■□□□□ 0.13
SPIDR-201ENST00000297423 CEP95Q96GE4 821 aa15.83■□□□□ 0.13
SPIDR-201ENST00000297423 LZTS2Q9BRK4 669 aa15.83■□□□□ 0.13
SPIDR-201ENST00000297423 MAP3K13O43283 966 aa15.83■□□□□ 0.12
SPIDR-201ENST00000297423 ESRRAP11474 423 aaPredicted RBP15.83■□□□□ 0.12
SPIDR-201ENST00000297423 CCDC127Q96BQ5 260 aa15.83■□□□□ 0.12
SPIDR-201ENST00000297423 GANQ9H2C0 597 aa15.83■□□□□ 0.12
SPIDR-201ENST00000297423 ADAM7Q9H2U9 754 aa15.83■□□□□ 0.12
SPIDR-201ENST00000297423 TDRD3Q9H7E2 651 aaKnown RBP15.83■□□□□ 0.12
SPIDR-201ENST00000297423 TMEM59LQ9UK28 342 aa15.83■□□□□ 0.12
SPIDR-201ENST00000297423 TROVE2P10155 538 aaKnown RBP eCLIP15.83■□□□□ 0.12
SPIDR-201ENST00000297423 NMT1P30419 496 aaKnown RBP15.83■□□□□ 0.12
SPIDR-201ENST00000297423 ITGA8P53708 1063 aa15.83■□□□□ 0.12
SPIDR-201ENST00000297423 DHX36Q9H2U1 1008 aaKnown RBP15.83■□□□□ 0.12
SPIDR-201ENST00000297423 PSTPIP2Q9H939 334 aa15.83■□□□□ 0.12
SPIDR-201ENST00000297423 MYH2Q9UKX2 1941 aa15.83■□□□□ 0.12
SPIDR-201ENST00000297423 RPTORQ8N122 1335 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 PYGMP11217 842 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 CTNNA2P26232 953 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 PIK3CAP42336 1068 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 KLRC3Q07444 240 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 KNOP1Q1ED39 458 aaKnown RBP15.82■□□□□ 0.12
SPIDR-201ENST00000297423 EMC10Q5UCC4 262 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 PPP1R21Q6ZMI0 780 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 MFN1Q8IWA4 741 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 ZDHHC15Q96MV8 337 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 EPAS1Q99814 870 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 CYP39A1Q9NYL5 469 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 NAALADL1Q9UQQ1 740 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.82■□□□□ 0.12
SPIDR-201ENST00000297423 SP100P23497 879 aaPredicted RBP15.82■□□□□ 0.12
SPIDR-201ENST00000297423 CETN1Q12798 172 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 THOC5Q13769 683 aaKnown RBP15.82■□□□□ 0.12
SPIDR-201ENST00000297423 R3HDM1Q15032 1099 aaKnown RBP15.82■□□□□ 0.12
SPIDR-201ENST00000297423 APOBEC3HQ6NTF7 200 aaKnown RBP15.82■□□□□ 0.12
SPIDR-201ENST00000297423 SLC25A41Q8N5S1 370 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 PRELID2Q8N945 189 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 PLVAPQ9BX97 442 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 PITPNM2Q9BZ72 1349 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 RBAK-RBAKDNI3L0D1 243 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 ZBED4O75132 1171 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 RARGP13631 454 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 PLS3P13797 630 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 SOX5P35711 763 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 AGGF1Q8N302 714 aaeCLIP15.82■□□□□ 0.122e-6■■□□□ 12.5
SPIDR-201ENST00000297423 LNX1Q8TBB1 728 aaPredicted RBP15.82■□□□□ 0.12
SPIDR-201ENST00000297423 MAIP1Q8WWC4 291 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 DDX4Q9NQI0 724 aaKnown RBP15.82■□□□□ 0.12
SPIDR-201ENST00000297423 KLHL11Q9NVR0 708 aa15.82■□□□□ 0.12
SPIDR-201ENST00000297423 DDX39AO00148 427 aaKnown RBP15.81■□□□□ 0.12
SPIDR-201ENST00000297423 KITP10721 976 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 ATF7P17544 494 aaPredicted RBP15.81■□□□□ 0.12
SPIDR-201ENST00000297423 MARK3P27448 753 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 PSMC6P62333 389 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 UBXN2AP68543 259 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 NFIAQ12857 509 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 EPC2Q52LR7 807 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 SYCP2LQ5T4T6 812 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 RFWD3Q6PCD5 774 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 CYP4X1Q8N118 509 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 ERMNQ8TAM6 284 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 C12orf65Q9H3J6 166 aaKnown RBP15.81■□□□□ 0.12
SPIDR-201ENST00000297423 DENND2DQ9H6A0 471 aaPredicted RBP15.81■□□□□ 0.12
SPIDR-201ENST00000297423 NMRK1Q9NWW6 199 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 SYNGAP1Q96PV0 1343 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 CASZ1Q86V15 1759 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 COILP38432 576 aaPredicted RBP15.81■□□□□ 0.12
SPIDR-201ENST00000297423 SPARCL1Q14515 664 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 KPNB1Q14974 876 aaKnown RBP15.81■□□□□ 0.12
SPIDR-201ENST00000297423 TTC27Q6P3X3 843 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 MAML1Q92585 1016 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 CARD9Q9H257 536 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 ARHGEF3Q9NR81 526 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 PI4KBQ9UBF8 816 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 DAB2IPQ5VWQ8 1189 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 TTBK2Q6IQ55 1244 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 KIFAP3Q92845 792 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 NMD3Q96D46 503 aaKnown RBP15.81■□□□□ 0.12
SPIDR-201ENST00000297423 CCDC17Q96LX7 622 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 RILPQ96NA2 401 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 SMYD3Q9H7B4 428 aa15.81■□□□□ 0.12
SPIDR-201ENST00000297423 TCP10L2B9ZVM9 353 aa15.8■□□□□ 0.12
SPIDR-201ENST00000297423 DCTN3O75935 186 aa15.8■□□□□ 0.12
SPIDR-201ENST00000297423 AKR1B1P15121 316 aa15.8■□□□□ 0.12
SPIDR-201ENST00000297423 ATP6V1C1P21283 382 aa15.8■□□□□ 0.12
SPIDR-201ENST00000297423 MYL7Q01449 175 aa15.8■□□□□ 0.12
SPIDR-201ENST00000297423 MPP2Q14168 576 aa15.8■□□□□ 0.12
SPIDR-201ENST00000297423 CERKLQ49MI3 558 aaPredicted RBP15.8■□□□□ 0.12
SPIDR-201ENST00000297423 DCAF12L1Q5VU92 463 aa15.8■□□□□ 0.12
SPIDR-201ENST00000297423 ZDHHC24Q6UX98 284 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms