RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 LTBP2Q14767 1821 aa16.45■□□□□ 0.22
CCDC140-201ENST00000295226 AP5Z1O43299 807 aa16.45■□□□□ 0.22
CCDC140-201ENST00000295226 DLATP10515 647 aaKnown RBP16.45■□□□□ 0.22
CCDC140-201ENST00000295226 ITGA4P13612 1032 aa16.45■□□□□ 0.22
CCDC140-201ENST00000295226 VAMP7P51809 220 aa16.45■□□□□ 0.22
CCDC140-201ENST00000295226 FAM189BP81408 668 aa16.45■□□□□ 0.22
CCDC140-201ENST00000295226 PLCB2Q00722 1185 aa16.45■□□□□ 0.22
CCDC140-201ENST00000295226 PPIGQ13427 754 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCDC140-201ENST00000295226 DCAF17Q5H9S7 520 aaPredicted RBP16.45■□□□□ 0.22
CCDC140-201ENST00000295226 C1orf220Q5T0J3 134 aa16.45■□□□□ 0.22
CCDC140-201ENST00000295226 AGMOQ6ZNB7 445 aa16.45■□□□□ 0.22
CCDC140-201ENST00000295226 FRMD5Q7Z6J6 570 aa16.45■□□□□ 0.22
CCDC140-201ENST00000295226 MRPL10Q7Z7H8 261 aaKnown RBP16.45■□□□□ 0.22
CCDC140-201ENST00000295226 BRSK2Q8IWQ3 736 aa16.45■□□□□ 0.22
CCDC140-201ENST00000295226 ZFP42Q96MM3 310 aa16.45■□□□□ 0.22
CCDC140-201ENST00000295226 MKNK1Q9BUB5 465 aa16.45■□□□□ 0.22
CCDC140-201ENST00000295226 TRAIPQ9BWF2 469 aa16.45■□□□□ 0.22
CCDC140-201ENST00000295226 VPS16Q9H269 839 aa16.45■□□□□ 0.22
CCDC140-201ENST00000295226 PTPRJQ12913 1337 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 CITO14578 2027 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 MICAL3Q7RTP6 2002 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 ZNF623O75123 536 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 UPP2O95045 317 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 GNA14O95837 355 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 FGFR1P11362 822 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 TPM4P67936 248 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 PTPN21Q16825 1174 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 GLRA4Q5JXX5 417 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 TCERG1LQ5VWI1 586 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 SCARA3Q6AZY7 606 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 ZNF598Q86UK7 904 aaKnown RBP16.44■□□□□ 0.22
CCDC140-201ENST00000295226 FAM114A1Q8IWE2 563 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 PARD3BQ8TEW8 1205 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 LBHD1Q9BQE6 289 aaPredicted RBP16.44■□□□□ 0.22
CCDC140-201ENST00000295226 TUBGCP2Q9BSJ2 902 aa16.44■□□□□ 0.22
CCDC140-201ENST00000295226 TTC26A0AVF1 554 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 LRRIQ3A6PVS8 624 aaPredicted RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 KRT13P13646 458 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 PRKCSHP14314 528 aaPredicted RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 ANK1P16157 1881 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 GATMP50440 423 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 TTC3P53804 2025 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 DEFB103AP81534 67 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 BFSP1Q12934 665 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 PSMD6Q15008 389 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 APTXQ7Z2E3 356 aaKnown RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 TRIM59Q8IWR1 403 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 ZNF516Q92618 1163 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 ZMAT2Q96NC0 199 aaKnown RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 NAP1L5Q96NT1 182 aaPredicted RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 GAD1Q99259 594 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 C1orf112Q9NSG2 853 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 MIOSQ9NXC5 875 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 NR2E3Q9Y5X4 410 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 LAMA2P24043 3122 aaKnown RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 TNRC18O15417 2968 aaPredicted RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 PES1O00541 588 aaKnown RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 MAPK13O15264 365 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 FGBP02675 491 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 NFICP08651 508 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 EEF1GP26641 437 aaKnown RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 MLH1P40692 756 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 RAB27AP51159 221 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 YARSP54577 528 aaKnown RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 MARSP56192 900 aaKnown RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 FANCCQ00597 558 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 PPP3CAQ08209 521 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 TMEM240Q5SV17 173 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 JADE1Q6IE81 842 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 FAM117BQ6P1L5 589 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 ALKAL1Q6UXT8 129 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 INTS8Q75QN2 995 aaKnown RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 EFCAB13Q8IY85 973 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 SNX27Q96L92 541 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 METTL14Q9HCE5 456 aaKnown RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 LIMA1Q9UHB6 759 aaKnown RBP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 PLAGL2Q9UPG8 496 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 INPP5FQ9Y2H2 1132 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 PCDHB7Q9Y5E2 793 aa16.43■□□□□ 0.22
CCDC140-201ENST00000295226 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCDC140-201ENST00000295226 ABHD14A-ACY1A0A1B0GW23 586 aa16.42■□□□□ 0.22
CCDC140-201ENST00000295226 ZBBXA8MT70 800 aa16.42■□□□□ 0.22
CCDC140-201ENST00000295226 SERPINC1P01008 464 aa16.42■□□□□ 0.22
CCDC140-201ENST00000295226 SKIP12755 728 aa16.42■□□□□ 0.22
CCDC140-201ENST00000295226 TNNI1P19237 187 aa16.42■□□□□ 0.22
CCDC140-201ENST00000295226 MAGEA10P43363 369 aaPredicted RBP16.42■□□□□ 0.22
CCDC140-201ENST00000295226 GCLMP48507 274 aa16.42■□□□□ 0.22
CCDC140-201ENST00000295226 GUCY2FP51841 1108 aa16.42■□□□□ 0.22
CCDC140-201ENST00000295226 COPB1P53618 953 aaKnown RBP16.42■□□□□ 0.22
CCDC140-201ENST00000295226 KYAT1Q16773 422 aa16.42■□□□□ 0.22
CCDC140-201ENST00000295226 MIIPQ5JXC2 388 aa16.42■□□□□ 0.22
CCDC140-201ENST00000295226 CLLU1OSQ5K130 101 aa16.42■□□□□ 0.22
CCDC140-201ENST00000295226 OR5B17Q8NGF7 314 aa16.42■□□□□ 0.22
CCDC140-201ENST00000295226 HELQQ8TDG4 1101 aa16.42■□□□□ 0.22
CCDC140-201ENST00000295226 SLC35C1Q96A29 364 aa16.42■□□□□ 0.22
CCDC140-201ENST00000295226 FNBP1Q96RU3 617 aa16.42■□□□□ 0.22
CCDC140-201ENST00000295226 CXXC1Q9P0U4 656 aaPredicted RBP16.42■□□□□ 0.22
CCDC140-201ENST00000295226 ARL5CA6NH57 179 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms