RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 DSTYKQ6XUX3 929 aa16.21■□□□□ 0.18
SHROOM4-201ENST00000289292 NSUN4Q96CB9 384 aaKnown RBP16.21■□□□□ 0.18
SHROOM4-201ENST00000289292 CLMNQ96JQ2 1002 aa16.21■□□□□ 0.18
SHROOM4-201ENST00000289292 PACSIN1Q9BY11 444 aa16.21■□□□□ 0.18
SHROOM4-201ENST00000289292 ANKZF1Q9H8Y5 726 aa16.21■□□□□ 0.18
SHROOM4-201ENST00000289292 SARS2Q9NP81 518 aaKnown RBP16.21■□□□□ 0.18
SHROOM4-201ENST00000289292 PCMTD2Q9NV79 361 aa16.21■□□□□ 0.18
SHROOM4-201ENST00000289292 SSU72P8A0A1W2PR75 194 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 F5H6K3 240 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 PDXKO00764 312 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 LCP1P13796 627 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 PAMP19021 973 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 KLRC3Q07444 240 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 CYB5D1Q6P9G0 228 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 LVRNQ6Q4G3 990 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 HAUS6Q7Z4H7 955 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 CATSPER3Q86XQ3 398 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 PDHBP11177 359 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 KLC1Q07866 573 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 RABGAP1LQ5R372 815 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 C12orf60Q5U649 245 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 RNF217Q8TC41 542 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 ZBTB10Q96DT7 871 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 SLC5A4Q9NY91 659 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 CAPN6Q9Y6Q1 641 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 CNTNAP5Q8WYK1 1306 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 FRA10AC1Q70Z53 315 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 NLGN1Q8N2Q7 840 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 TMA16Q96EY4 203 aaKnown RBP16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 MCEEQ96PE7 176 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 ZNF302Q9NR11 478 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 CCDC22O60826 627 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 EYA4O95677 639 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 BCAR1P56945 870 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 ANO4Q32M45 955 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 FASTKD1Q53R41 847 aaKnown RBP16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 RNF139Q8WU17 664 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 DHX38Q92620 1227 aaKnown RBP16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 SESN2P58004 480 aaPredicted RBP16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 BZW1Q7L1Q6 419 aaKnown RBP16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 TEX2Q8IWB9 1127 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 GIPC2Q8TF65 315 aa16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 HNRNPLLQ8WVV9 542 aaKnown RBP16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 SUCLA2Q9P2R7 463 aaPredicted RBP16.2■□□□□ 0.18
SHROOM4-201ENST00000289292 A0A1W2PQJ5 194 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 TCN1P20061 433 aaPredicted RBP16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 SMARCA1P28370 1054 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 FOXR1Q6PIV2 292 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 GALNT4Q8N4A0 578 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 UNC45AQ9H3U1 944 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 SUN2Q9UH99 717 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 ARHGAP26Q9UNA1 814 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 CHMP2BQ9UQN3 213 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 ADGRL3Q9HAR2 1447 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 SDC4P31431 198 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 YWHABP31946 246 aaKnown RBP16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 FAM47DPA6NHR8 397 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 SLC16A3O15427 465 aaKnown RBP16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 KDM1AO60341 852 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 TBXAS1P24557 533 aaPredicted RBP16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 ACOT2P49753 483 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 CNGA3Q16281 694 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 MAPK6Q16659 721 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 DDIASQ8IXT1 998 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 DLGAP2Q9P1A6 1054 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 APOL1O14791 398 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 KRT7P08729 469 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 BTKQ06187 659 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 OVGP1Q12889 678 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 ORC2Q13416 577 aaPredicted RBP16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 CCDC92Q53HC0 331 aaPredicted RBP16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 RARS2Q5T160 578 aaKnown RBP16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 C18orf8Q96DM3 657 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 CCND1P24385 295 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 RBBP7Q16576 425 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 SNRNP48Q6IEG0 339 aaKnown RBP16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 ARMCX2Q7L311 632 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 DNAJC9Q8WXX5 260 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 WWP1Q9H0M0 922 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 PALMDQ9NP74 551 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 SLC12A6Q9UHW9 1150 aa16.19■□□□□ 0.18
SHROOM4-201ENST00000289292 ARHGAP10A1A4S6 786 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 DGKIO75912 1065 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 SERPINB4P48594 390 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 PTPAQ15257 358 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 KDM7AQ6ZMT4 941 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 PDCD6IPQ8WUM4 868 aaKnown RBP16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 SPATA17Q96L03 361 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 RHBDL2Q9NX52 303 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 AGO2Q9UKV8 859 aaKnown RBP16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 PXDNLA1KZ92 1463 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 TFRCP02786 760 aaKnown RBP16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 DAB2P98082 770 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 SMTNL2Q2TAL5 461 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 TEX9Q8N6V9 391 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 PI4K2AQ9BTU6 479 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 BATF3Q9NR55 127 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 FEM1BQ9UK73 627 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 PYGBP11216 843 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 TMED8Q6PL24 325 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms