RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SSBP05455 408 aaKnown RBP eCLIP10.06□□□□□ -0.8
HMGN1-201ENST00000288344 HSP90AA1P07900 732 aaKnown RBP10.06□□□□□ -0.8
HMGN1-201ENST00000288344 BMP1P13497 986 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 NMT1P30419 496 aaKnown RBP10.06□□□□□ -0.8
HMGN1-201ENST00000288344 ADSSP30520 456 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 MLH1P40692 756 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 GRM5P41594 1212 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 CASP5P51878 434 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 NCBP1Q09161 790 aaKnown RBP10.06□□□□□ -0.8
HMGN1-201ENST00000288344 KCNA1Q09470 495 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 ADAM15Q13444 863 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 DHX8Q14562 1220 aaKnown RBP10.06□□□□□ -0.8
HMGN1-201ENST00000288344 CCDC85BQ15834 202 aaPredicted RBP10.06□□□□□ -0.8
HMGN1-201ENST00000288344 CSPP1Q1MSJ5 1256 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 SLC10A6Q3KNW5 377 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 ZC2HC1CQ53FD0 456 aaPredicted RBP10.06□□□□□ -0.8
HMGN1-201ENST00000288344 TCEAL5Q5H9L2 206 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 TMEM184AQ6ZMB5 413 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 SV2BQ7L1I2 683 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 ADGRD2Q7Z7M1 963 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 MAP4K3Q8IVH8 894 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 MRPL43Q8N983 215 aaKnown RBP10.06□□□□□ -0.8
HMGN1-201ENST00000288344 RNF169Q8NCN4 708 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 ZMAT2Q96NC0 199 aaKnown RBP10.06□□□□□ -0.8
HMGN1-201ENST00000288344 PPP1R10Q96QC0 940 aaKnown RBP10.06□□□□□ -0.8
HMGN1-201ENST00000288344 MRPL4Q9BYD3 311 aaKnown RBP10.06□□□□□ -0.8
HMGN1-201ENST00000288344 TRIM9Q9C026 710 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 TNMDQ9H2S6 317 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 IKZF4Q9H2S9 585 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 CUEDC2Q9H467 287 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 OLFML3Q9NRN5 406 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 SPG21Q9NZD8 308 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 PCDHB12Q9Y5F1 795 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 PCDHGC5Q9Y5F6 944 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 ANKRD63C9JTQ0 380 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 F8W810 466 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 SPTLC1O15269 473 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 POLR2DO15514 142 aaKnown RBP10.05□□□□□ -0.8
HMGN1-201ENST00000288344 KLRC4O43908 158 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 TOM1L1O75674 476 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 RECQL4O94761 1208 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 PAPLNO95428 1278 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 GLP2RO95838 553 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 POMCP01189 267 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 ALDH2P05091 517 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 MCF2P10911 925 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 KCNE1P15382 129 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 GTF2F1P35269 517 aaKnown RBP eCLIP10.05□□□□□ -0.8
HMGN1-201ENST00000288344 SCNN1GP51170 649 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 DLX2Q07687 328 aaPredicted RBP10.05□□□□□ -0.8
HMGN1-201ENST00000288344 BECN1Q14457 450 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 DCAF4L1Q3SXM0 396 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 MPZL3Q6UWV2 235 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 EPM2AIP1Q7L775 607 aaPredicted RBP10.05□□□□□ -0.8
HMGN1-201ENST00000288344 DYMQ7RTS9 669 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 DDX53Q86TM3 631 aaKnown RBP10.05□□□□□ -0.8
HMGN1-201ENST00000288344 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.05□□□□□ -0.8
HMGN1-201ENST00000288344 MYCT1Q8N699 235 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 PDILTQ8N807 584 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 GLIS3Q8NEA6 775 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 VN1R2Q8NFZ6 395 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 STAMQ92783 540 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 ZNF558Q96NG5 402 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 PAAF1Q9BRP4 392 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 NSUN3Q9H649 340 aaKnown RBP10.05□□□□□ -0.8
HMGN1-201ENST00000288344 AAASQ9NRG9 546 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 CHST7Q9NS84 486 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 KLK14Q9P0G3 267 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 SEL1LQ9UBV2 794 aa10.05□□□□□ -0.8
HMGN1-201ENST00000288344 CITO14578 2027 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 PDCD11Q14690 1871 aaKnown RBP10.04□□□□□ -0.8
HMGN1-201ENST00000288344 SMIM28A0A1B0GU29 152 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 A0A1W2PQ27 194 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 A0A1W2PQ64 194 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 A0A1W2PQD8 194 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 TTC26A0AVF1 554 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 GOLGA8CPA6NN73 597 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 HIDE1A8MVS5 230 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 SLFN14P0C7P3 912 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 ALDH7A1P49419 539 aaKnown RBP10.04□□□□□ -0.8
HMGN1-201ENST00000288344 SMTNP53814 917 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 NUCB2P80303 420 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 SOX4Q06945 474 aaPredicted RBP10.04□□□□□ -0.8
HMGN1-201ENST00000288344 PTPROQ16827 1216 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 ZBTB41Q5SVQ8 909 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 KIAA0319Q5VV43 1072 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 PDE12Q6L8Q7 609 aaKnown RBP10.04□□□□□ -0.8
HMGN1-201ENST00000288344 CRELD2Q6UXH1 353 aaPredicted RBP10.04□□□□□ -0.8
HMGN1-201ENST00000288344 TAS1R1Q7RTX1 841 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 SFR1Q86XK3 245 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 ABI1Q8IZP0 508 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 IQUBQ8NA54 791 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 ENGASEQ8NFI3 743 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.04□□□□□ -0.8
HMGN1-201ENST00000288344 ATXN2LQ8WWM7 1075 aaKnown RBP10.04□□□□□ -0.8
HMGN1-201ENST00000288344 PABPC5Q96DU9 382 aaKnown RBP10.04□□□□□ -0.8
HMGN1-201ENST00000288344 MSLNLQ96KJ4 702 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 SCAND2PQ9GZW5 306 aaPredicted RBP10.04□□□□□ -0.8
HMGN1-201ENST00000288344 ZBP1Q9H171 429 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 CLEC1BQ9P126 229 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms