RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CCDC50Q8IVM0 306 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 XXYLT1Q8NBI6 393 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 RAPGEF5Q92565 580 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 PCYT2Q99447 389 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 OSBPL7Q9BZF2 842 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 ST6GALNAC4Q9H4F1 302 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 UTP11Q9Y3A2 253 aaKnown RBP19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 GFPT2O94808 682 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 FARP2O94887 1054 aaPredicted RBP19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 CCDC172P0C7W6 258 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 CNGA1P29973 690 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 FLT3P36888 993 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 JAM2P57087 298 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 MYL7Q01449 175 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 ALCAMQ13740 583 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 LACTB2Q53H82 288 aaPredicted RBP19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 ANKRD20A8PQ5CZ79 823 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 TATDN2Q93075 761 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 HES6Q96HZ4 224 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 TIPINQ9BVW5 301 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 POLR3FQ9H1D9 316 aaPredicted RBP19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 CNOT8Q9UFF9 292 aaKnown RBP19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 GSTTP1A0A1W2PQM5 241 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 F8VZ95 297 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 DGAT1O75907 488 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 QPCTQ16769 361 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 NT5DC3Q86UY8 548 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 ELMO3Q96BJ8 720 aa19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 INTS2Q9H0H0 1204 aaKnown RBP19.67■□□□□ 0.74
PDLIM3-201ENST00000284767 GTPBP10A4D1E9 387 aaKnown RBP19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 ITGA4P13612 1032 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 VAMP7P51809 220 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 MAGOHP61326 146 aaKnown RBP19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 DHX9Q08211 1270 aaKnown RBP19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 PPP2R5AQ15172 486 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 XKR3Q5GH77 459 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 GKAP1Q5VSY0 366 aaPredicted RBP19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 MAP4K3Q8IVH8 894 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 MAGOHBQ96A72 148 aaKnown RBP19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 CENPTQ96BT3 561 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 POP1Q99575 1024 aaKnown RBP19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 PORCNQ9H237 461 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 ATP6V0A4Q9HBG4 840 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 CD248Q9HCU0 757 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 DNAJC12Q9UKB3 198 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 MAFBQ9Y5Q3 323 aaPredicted RBP19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 SOCS7O14512 581 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 TTI1O43156 1089 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 ATG7O95352 703 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 GGPS1O95749 300 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 KRT13P13646 458 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 KRT71Q3SY84 523 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 PREPLQ4J6C6 727 aaPredicted RBP19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 PHLDB3Q6NSJ2 640 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 TAS1R3Q7RTX0 852 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 DAAM2Q86T65 1068 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 KIFAP3Q92845 792 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 CCDC127Q96BQ5 260 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 DIS3Q9Y2L1 958 aaKnown RBP19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 MCM3APO60318 1980 aa19.66■□□□□ 0.74
PDLIM3-201ENST00000284767 PPFIA2O75334 1257 aa19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 OATP04181 439 aa19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 POLGP54098 1239 aaPredicted RBP19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 EMC2Q15006 297 aa19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 PPP2R5EQ16537 467 aa19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 ARHGAP44Q17R89 818 aa19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 TRIM50Q86XT4 487 aa19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 LMO3Q8TAP4 145 aa19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 TLCD1Q96CP7 247 aa19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 RAB17Q9H0T7 212 aa19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 POU5F1Q01860 360 aaKnown RBP19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 DRAP1Q14919 205 aaPredicted RBP19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 SNCBQ16143 134 aa19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 INTS8Q75QN2 995 aaKnown RBP19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 FBXO16Q8IX29 292 aaPredicted RBP19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 MAGEC3Q8TD91 643 aa19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 GPR88Q9GZN0 384 aa19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 AMFRQ9UKV5 643 aa19.65■□□□□ 0.74
PDLIM3-201ENST00000284767 DNM1LO00429 736 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 GHRP10912 638 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 FERP16591 822 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 BYSLQ13895 437 aaKnown RBP19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 LDLRAD1Q5T700 205 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 CYB5D1Q6P9G0 228 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 HOOK3Q86VS8 718 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 C12orf56Q8IXR9 622 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 FUKQ8N0W3 1084 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 SGSM3Q96HU1 749 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 TXLNGYQ9BZA5 131 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 TOPORSQ9NS56 1045 aaPredicted RBP19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 DKC1O60832 514 aaKnown RBP eCLIP19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 MARK3P27448 753 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 NEDD9Q14511 834 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 SNRNP35Q16560 246 aaKnown RBP19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 PTPROQ16827 1216 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 HSDL1Q3SXM5 330 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 WLSQ5T9L3 541 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 PARP9Q8IXQ6 854 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 MCPH1Q8NEM0 835 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 ASAP3Q8TDY4 903 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms