RNA–Protein interactions for RNA: ENST00000284273.5

UBASH3B-201, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBASH3B, Length 6,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-201ENST00000284273 EPHX2P34913 555 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 PLCL1Q15111 1095 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 NAALADL2Q58DX5 795 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 ZNF713Q8N859 430 aaPredicted RBP12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 LINC00301Q8NCQ3 95 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 MAD2L2Q9UI95 211 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 TRIM17Q9Y577 477 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 HMOX2P30519 316 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 GPC5P78333 572 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 CDH18Q13634 790 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 TAF11Q15544 211 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 ALFQ53S48 1182 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 ATPAF2Q8N5M1 289 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 NAF1Q96HR8 494 aaKnown RBP12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 SPACA7Q96KW9 195 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 ZNF560Q96MR9 790 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 GTF2A1LQ9UNN4 478 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 ANKARQ7Z5J8 1434 aa12.54□□□□□ -0.4
UBASH3B-201ENST00000284273 SUPT3HO75486 399 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 MBL2P11226 248 aaPredicted RBP12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 SLC16A1P53985 500 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 TOMM20Q15388 145 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 FOPNLQ96NB1 174 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 GPR63Q9BZJ6 419 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 ARL4CP56559 192 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 ZSCAN26Q16670 478 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 KNOP1Q1ED39 458 aaKnown RBP12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 LRRC8EQ6NSJ5 796 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 FBXO16Q8IX29 292 aaPredicted RBP12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 RNF19AQ9NV58 838 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 CD274Q9NZQ7 290 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 CEP170Q5SW79 1584 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 NEO1Q92859 1461 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 DCDC2CA8MYV0 355 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 MYO1GB0I1T2 1018 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 RASA4BC9J798 803 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 RASA4O43374 803 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 CPT1AP50416 773 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 EPC2Q52LR7 807 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 ENOX1Q8TC92 643 aaKnown RBP12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 PCDHGB4Q9UN71 923 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 NCF1BA6NI72 391 aaPredicted RBP12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 NCF1CA8MVU1 366 aaPredicted RBP12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 CALB1P05937 261 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 NCAM1P13591 858 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 NCF1P14598 390 aaPredicted RBP12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 SFNP31947 248 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 AVPR1AP37288 418 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 HARS2P49590 506 aaKnown RBP12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 GYS2P54840 703 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 EFTUD2Q15029 972 aaKnown RBP eCLIP12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 PRR5LQ6MZQ0 368 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 MIB1Q86YT6 1006 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 TRIM42Q8IWZ5 723 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 SRRM1Q8IYB3 904 aaKnown RBP12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 IPMKQ8NFU5 416 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 EXOC4Q96A65 974 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 WARS2Q9UGM6 360 aaKnown RBP12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 TMED1Q13445 227 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 GOLGA7BQ2TAP0 167 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 HAUS6Q7Z4H7 955 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 ELAC2Q9BQ52 826 aaKnown RBP12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 EFHD1Q9BUP0 239 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 BRIP1Q9BX63 1249 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 TEX12Q9BXU0 123 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.53□□□□□ -0.41e-8■□□□□ 11.2
UBASH3B-201ENST00000284273 A8MX80 341 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 PCDH8O95206 1070 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 NNTQ13423 1086 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 ARID5BQ14865 1188 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 ACAD11Q709F0 780 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 MIER2Q8N344 545 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 PNMA5Q96PV4 448 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 SMARCAD1Q9H4L7 1026 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 IL1RL2Q9HB29 575 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 TMEM39AQ9NV64 488 aa12.53□□□□□ -0.4
UBASH3B-201ENST00000284273 DDNO94850 711 aaPredicted RBP12.52□□□□□ -0.4
UBASH3B-201ENST00000284273 NDUFA10O95299 355 aa12.52□□□□□ -0.4
UBASH3B-201ENST00000284273 GUCY1A2P33402 732 aa12.52□□□□□ -0.4
UBASH3B-201ENST00000284273 ALCAMQ13740 583 aa12.52□□□□□ -0.4
UBASH3B-201ENST00000284273 NUGGCQ68CJ6 796 aa12.52□□□□□ -0.4
UBASH3B-201ENST00000284273 SLC44A2Q8IWA5 706 aaPredicted RBP12.52□□□□□ -0.4
UBASH3B-201ENST00000284273 ZFP42Q96MM3 310 aa12.52□□□□□ -0.4
UBASH3B-201ENST00000284273 MCEEQ96PE7 176 aa12.52□□□□□ -0.4
UBASH3B-201ENST00000284273 CIPCQ9C0C6 399 aa12.52□□□□□ -0.4
UBASH3B-201ENST00000284273 LZTS3O60299 673 aaPredicted RBP12.52□□□□□ -0.4
UBASH3B-201ENST00000284273 TMEM169Q96HH4 297 aa12.52□□□□□ -0.4
UBASH3B-201ENST00000284273 PBKQ96KB5 322 aa12.52□□□□□ -0.4
UBASH3B-201ENST00000284273 TNIP3Q96KP6 325 aa12.52□□□□□ -0.4
UBASH3B-201ENST00000284273 GBA2Q9HCG7 927 aaPredicted RBP12.52□□□□□ -0.4
UBASH3B-201ENST00000284273 CASTOR2A6NHX0 329 aa12.52□□□□□ -0.41
UBASH3B-201ENST00000284273 UBXN8O00124 270 aa12.52□□□□□ -0.41
UBASH3B-201ENST00000284273 ZC2HC1CQ53FD0 456 aaPredicted RBP12.52□□□□□ -0.41
UBASH3B-201ENST00000284273 CDC42BPGQ6DT37 1551 aa12.52□□□□□ -0.41
UBASH3B-201ENST00000284273 PTRHD1Q6GMV3 140 aaKnown RBP12.52□□□□□ -0.41
UBASH3B-201ENST00000284273 UNC13DQ70J99 1090 aa12.52□□□□□ -0.41
UBASH3B-201ENST00000284273 TRIM45Q9H8W5 580 aaPredicted RBP12.52□□□□□ -0.41
UBASH3B-201ENST00000284273 GPR108Q9NPR9 543 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms