RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 ATP8B1O43520 1251 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 EYA4O95677 639 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 MYBL1P10243 752 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 AKT1P31749 480 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 DAB2P98082 770 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 SNAPC2Q13487 334 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 MTM1Q13496 603 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 MCEEQ96PE7 176 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 SENP1Q9P0U3 644 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 PLEKHG2Q9H7P9 1386 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 TLR2O60603 784 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 ETFBP38117 255 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 LRRC8EQ6NSJ5 796 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 SAMD7Q7Z3H4 446 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 NEDD1Q8NHV4 660 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 DOLKQ9UPQ8 538 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 RPS6KA5O75582 802 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 NDUFB10O96000 172 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 ALDH1A1P00352 501 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 KIZQ2M2Z5 673 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 ZC2HC1CQ53FD0 456 aaPredicted RBP12.54□□□□□ -0.4
SHPRH-201ENST00000275233 EFHBQ8N7U6 833 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 PPHLN1Q8NEY8 458 aaKnown RBP12.54□□□□□ -0.4
SHPRH-201ENST00000275233 UBA3Q8TBC4 463 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 TRIM54Q9BYV2 358 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 ABCA8O94911 1581 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 MCF2P10911 925 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 BRAFP15056 766 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 AARSP49588 968 aaKnown RBP eCLIP12.54□□□□□ -0.4
SHPRH-201ENST00000275233 EMBQ6PCB8 327 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 CATSPER3Q86XQ3 398 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 PABPC5Q96DU9 382 aaKnown RBP12.54□□□□□ -0.4
SHPRH-201ENST00000275233 ZNF512Q96ME7 567 aaPredicted RBP12.54□□□□□ -0.4
SHPRH-201ENST00000275233 MTMR4Q9NYA4 1195 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 BFARQ9NZS9 450 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 GGT7Q9UJ14 662 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 MYO1DO94832 1006 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 PPP3CCP48454 512 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 MTF1Q14872 753 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 REEP2Q9BRK0 252 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 TMEM60Q9H2L4 133 aa12.54□□□□□ -0.4
SHPRH-201ENST00000275233 CELF2O95319 508 aaKnown RBP12.53□□□□□ -0.4
SHPRH-201ENST00000275233 SKIP12755 728 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 GFAPP14136 432 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 ZFYVE28Q9HCC9 887 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 TUFT1Q9NNX1 390 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 ARHGAP31Q2M1Z3 1444 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 PDHA1P08559 390 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 HSD17B4P51659 736 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 ST8SIA6P61647 398 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 ATP2C1P98194 919 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-201ENST00000275233 AMHR2Q16671 573 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 CCDC144BQ3MJ40 725 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 PRR5LQ6MZQ0 368 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 STOX1Q6ZVD7 989 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 EPAS1Q99814 870 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-201ENST00000275233 AMACRQ9UHK6 382 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 CRB1P82279 1406 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 MFN1Q8IWA4 741 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 ELMO2Q96JJ3 720 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 FAM161BQ96MY7 647 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 ZNF521Q96K83 1311 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 MEFVO15553 781 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-201ENST00000275233 GH1P01241 217 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 PYGLP06737 847 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 MAP4P27816 1152 aaKnown RBP12.53□□□□□ -0.4
SHPRH-201ENST00000275233 CCDC85BQ15834 202 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-201ENST00000275233 ATG9AQ7Z3C6 839 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 PRR23AA6NEV1 266 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 PNMA6AP0CW24 399 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-201ENST00000275233 EFNA5P52803 228 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 ALDH18A1P54886 795 aaKnown RBP12.53□□□□□ -0.4
SHPRH-201ENST00000275233 PDAP1Q13442 181 aaKnown RBP12.53□□□□□ -0.4
SHPRH-201ENST00000275233 FLOT2Q14254 428 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 EFCAB12Q6NXP0 572 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 ATP11CQ8NB49 1132 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 PI4K2AQ9BTU6 479 aa12.53□□□□□ -0.4
SHPRH-201ENST00000275233 RNF103-CHMP3A0A140T963 221 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 SPDYE5A6NIY4 337 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 ORC4O43929 436 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 APRTP07741 180 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 ITGA4P13612 1032 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 GMPSP49915 693 aaPredicted RBP12.52□□□□□ -0.4
SHPRH-201ENST00000275233 NCOA4Q13772 614 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 GTF2H3Q13889 308 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 SPDYE7PQ495Y7 208 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 CDR2LQ86X02 465 aaPredicted RBP12.52□□□□□ -0.4
SHPRH-201ENST00000275233 C18orf8Q96DM3 657 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 TMEM117Q9H0C3 514 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 SMARCAD1Q9H4L7 1026 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 CHD1O14646 1710 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 CCL15-CCL14A0A0B4J2E2 113 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 GTPBP10A4D1E9 387 aaKnown RBP12.52□□□□□ -0.4
SHPRH-201ENST00000275233 RTN2O75298 545 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 WEE2P0C1S8 567 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 CAV1Q03135 178 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 CCL15Q16663 113 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 CCDC157Q569K6 752 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 STRIP1Q5VSL9 837 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms