RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 SPICE1Q8N0Z3 855 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 TMA16Q96EY4 203 aaKnown RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 EPS8L2Q9H6S3 715 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 EXOSC4Q9NPD3 245 aaKnown RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 WDR35Q9P2L0 1181 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 SLC26A4O43511 780 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 EIF2S1P05198 315 aaKnown RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 CSTF3Q12996 717 aaKnown RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 STILQ15468 1287 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 P3H1Q32P28 736 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 CCDC103Q8IW40 242 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 THNSL1Q8IYQ7 743 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 HNRNPLLQ8WVV9 542 aaKnown RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 FRMD8Q9BZ67 464 aaPredicted RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 SARS2Q9NP81 518 aaKnown RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 APPL1Q9UKG1 709 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 NCKAP5LQ9HCH0 1330 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 PHF20L1A8MW92 1017 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 HNRNPH1P31943 449 aaKnown RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 EIF3EP60228 445 aaKnown RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 ITIH4Q14624 930 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 USP17L2Q6R6M4 530 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 INPP5DQ92835 1189 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 RBM15Q96T37 977 aaKnown RBP eCLIP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 OSBPL8Q9BZF1 889 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 RIC8BQ9NVN3 520 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 IMPDH2P12268 514 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 IL6STP40189 918 aaPredicted RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 SUPT20HL1Q3ZLR7 823 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 OR6P1Q8NGX9 317 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 FAM162AQ96A26 154 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 THTPAQ9BU02 230 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 PCSK1NQ9UHG2 260 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 DTNAQ9Y4J8 743 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 KAT6BQ8WYB5 2073 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 PRKAB2O43741 272 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 DLGAP3O95886 979 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 ALBP02768 609 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 UBTFL6P0CB48 400 aaPredicted RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 NNMTP40261 264 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 CTCFP49711 727 aaPredicted RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 RASGRP2Q7LDG7 609 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 TAS2R42Q7RTR8 314 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 PASD1Q8IV76 773 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 MMGT1Q8N4V1 131 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 CASP10Q92851 521 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 TRIM63Q969Q1 353 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 SH3KBP1Q96B97 665 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 CNGB3Q9NQW8 809 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 NDFIP2Q9NV92 336 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 SPDYE5A6NIY4 337 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 PPEF1O14829 653 aaPredicted RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 ZBTB5O15062 677 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 ARIH2O95376 493 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 MYL2P10916 166 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 PLA2G4AP47712 749 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 ZNF200P98182 395 aaPredicted RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 STXBP2Q15833 593 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 DOK7Q18PE1 504 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 SPDYE7PQ495Y7 208 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 CCDC24Q8N4L8 307 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 ARHGEF1Q92888 912 aaKnown RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 ASIC4Q96FT7 647 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 WDR24Q96S15 920 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 C20orf96Q9NUD7 363 aaPredicted RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 PCDHA6Q9UN73 950 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 PCDHA8Q9Y5H6 950 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 MLH3Q9UHC1 1453 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 IGF2BP3O00425 579 aaKnown RBP eCLIP9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 SOX6P35712 828 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 CDH6P55285 790 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 TOB2Q14106 344 aaPredicted RBP9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 GLYCTKQ8IVS8 523 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 DCDC2Q9UHG0 476 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 PRG3Q9Y2Y8 225 aaPredicted RBP9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 BIVM-ERCC5R4GMW8 1640 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 UBA6A0AVT1 1052 aaPredicted RBP9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 TRPC5OSA6NMA1 111 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 SNTNA6NMZ2 147 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 H0YC42 278 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 PDXKO00764 312 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 KCNQ3O43525 872 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 SPRP35270 261 aaPredicted RBP9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 IRAK1P51617 712 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 MTFR1Q15390 333 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 SLC18A3Q16572 532 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 ZCWPW2Q504Y3 356 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 TLK2Q86UE8 772 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 VPS33BQ9H267 617 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 SAC3D1A6NKF1 404 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 ZNF839A8K0R7 811 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 PSMD14O00487 310 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 XPO1O14980 1071 aaKnown RBP9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 TEX33O43247 280 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 BBOX1O75936 387 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 USP1O94782 785 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 SNRPAP09012 282 aaKnown RBP9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 STAT3P40763 770 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 PURAQ00577 322 aaKnown RBP9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 CENPCQ03188 943 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms