RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 GTPBP10A4D1E9 387 aaKnown RBP15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 MAFGO15525 162 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 CLDN3O15551 220 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 DKC1O60832 514 aaKnown RBP eCLIP15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 HSF2BPO75031 334 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 FARP2O94887 1054 aaPredicted RBP15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 MMS22LQ6ZRQ5 1243 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 MAATS1Q7Z4T9 603 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 OR5B17Q8NGF7 314 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 C12orf42Q96LP6 360 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 NRBP2Q9NSY0 501 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 RBPJLQ9UBG7 517 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 NXF1Q9UBU9 619 aaKnown RBP15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 PCDHGC5Q9Y5F6 944 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 PTPRJQ12913 1337 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 ZNF516Q92618 1163 aa15.71■□□□□ 0.1
TRAFD1-201ENST00000257604 GINM1Q9NU53 330 aa15.71■□□□□ 0.1
TRAFD1-201ENST00000257604 PCDHB4Q9Y5E5 795 aa15.71■□□□□ 0.1
TRAFD1-201ENST00000257604 UMODL1Q5DID0 1318 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 ATAD5Q96QE3 1844 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 LYPLA2O95372 231 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 CFHP08603 1231 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 HNRNPH1P31943 449 aaKnown RBP15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 PRKCIP41743 596 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 OAZ1P54368 228 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 NNTQ13423 1086 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 ZNF662Q6ZS27 426 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 LMBR1Q8WVP7 490 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 SEPT1Q8WYJ6 367 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 PCYT2Q99447 389 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 TRIM51Q9BSJ1 452 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 ADAMTS5Q9UNA0 930 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 ALG6Q9Y672 507 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 UBE4BO95155 1302 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 SMIM23A6NLE4 172 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 B4GALT5O43286 388 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 HLA-DRAP01903 254 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 ZNF286BP0CG31 522 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 SNX1Q13596 522 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 ALCAMQ13740 583 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 RFFLQ8WZ73 363 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 HAPLN2Q9GZV7 340 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 FER1L6Q2WGJ9 1857 aa15.7■□□□□ 0.1
TRAFD1-201ENST00000257604 TTI1O43156 1089 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 SART1O43290 800 aaKnown RBP15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 STBD1O95210 358 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 VPS41P49754 854 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 CAPSQ13938 189 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 SLC9A9Q8IVB4 645 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 KCTD17Q8N5Z5 321 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 USP38Q8NB14 1042 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 EPS8L1Q8TE68 723 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 CEP89Q96ST8 783 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 JPH2Q9BR39 696 aaPredicted RBP15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 NUP85Q9BW27 656 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 WEE2P0C1S8 567 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 CYP11B1P15538 503 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 C11orf70Q9BRQ4 267 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 TMEM8AQ9HCN3 771 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 CD248Q9HCU0 757 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 KLHL11Q9NVR0 708 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 PNMA2Q9UL42 364 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 PGRMC1O00264 195 aaKnown RBP15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 FGFR4P22455 802 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 TNNC1P63316 161 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 FAM182AQ5T1J6 154 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 KCNV1Q6PIU1 500 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 RIOX2Q8IUF8 465 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 MMGT1Q8N4V1 131 aa15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 RNPC3Q96LT9 517 aaKnown RBP15.69■□□□□ 0.1
TRAFD1-201ENST00000257604 KIAA1217Q5T5P2 1943 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 OPA1O60313 960 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 ACTN3Q08043 901 aaPredicted RBP15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 NEDD9Q14511 834 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 NT5DC3Q86UY8 548 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 ALG3Q92685 438 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 MTMR12Q9C0I1 747 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 TSKSQ9UJT2 592 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 AKT3Q9Y243 479 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 DAPK3O43293 454 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 COMTP21964 271 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 TMOD1P28289 359 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 KCNJ1P48048 391 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 IFT88Q13099 833 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 BRDTQ58F21 947 aaPredicted RBP15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 TDRD10Q5VZ19 366 aaKnown RBP15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 FAM160B1Q5W0V3 765 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 CHADLQ6NUI6 762 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 XRRA1Q6P2D8 792 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 USP37Q86T82 979 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 CASKIN2Q8WXE0 1202 aa15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 CNOT8Q9UFF9 292 aaKnown RBP15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 COL11A1P12107 1806 aaPredicted RBP15.68■□□□□ 0.1
TRAFD1-201ENST00000257604 ANKRD62A6NC57 917 aa15.67■□□□□ 0.1
TRAFD1-201ENST00000257604 GOLGA8KD6RF30 607 aa15.67■□□□□ 0.1
TRAFD1-201ENST00000257604 PIK3R2O00459 728 aa15.67■□□□□ 0.1
TRAFD1-201ENST00000257604 VTNP04004 478 aa15.67■□□□□ 0.1
TRAFD1-201ENST00000257604 EPHB4P54760 987 aa15.67■□□□□ 0.1
TRAFD1-201ENST00000257604 TRIP13Q15645 432 aaPredicted RBP15.67■□□□□ 0.1
TRAFD1-201ENST00000257604 ARMC9Q7Z3E5 817 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms