RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 TRIM9Q9C026 710 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 HAPLN2Q9GZV7 340 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 IKZF4Q9H2S9 585 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 ST6GALNAC4Q9H4F1 302 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 MRPL44Q9H9J2 332 aaKnown RBP9.33□□□□□ -0.92
TMEM258-201ENST00000257262 TLR9Q9NR96 1032 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 ANKFY1Q9P2R3 1169 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 SEL1LQ9UBV2 794 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 PUF60Q9UHX1 559 aaKnown RBP9.33□□□□□ -0.92
TMEM258-201ENST00000257262 LZTS1Q9Y250 596 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 HPSEQ9Y251 543 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 FAN1Q9Y2M0 1017 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 PCDHGC5Q9Y5F6 944 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 EYSQ5T1H1 3165 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 TRIP11Q15643 1979 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 FRMD3A2A2Y4 597 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 CARNS1A5YM72 827 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 ANKRD63C9JTQ0 380 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 PTGESO14684 152 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 HNRNPDLO14979 420 aaKnown RBP9.32□□□□□ -0.92
TMEM258-201ENST00000257262 PIGRP01833 764 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 THP07101 528 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 ABCD1P33897 745 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 GTF2F1P35269 517 aaKnown RBP eCLIP9.32□□□□□ -0.92
TMEM258-201ENST00000257262 MATR3P43243 847 aaKnown RBP eCLIP9.32□□□□□ -0.92
TMEM258-201ENST00000257262 LIG4P49917 911 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 CASP5P51878 434 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 NDUFA8P51970 172 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 YARSP54577 528 aaKnown RBP9.32□□□□□ -0.92
TMEM258-201ENST00000257262 MCL1Q07820 350 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 DSC1Q08554 894 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 HYAL1Q12794 435 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 GRIK3Q13003 919 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 NAB2Q15742 525 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 TIGD5Q53EQ6 642 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 SLC39A4Q6P5W5 647 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 ALKAL1Q6UXT8 129 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 TMC7Q7Z402 723 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 ADGRD2Q7Z7M1 963 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 RBM23Q86U06 439 aaKnown RBP9.32□□□□□ -0.92
TMEM258-201ENST00000257262 MAP4K3Q8IVH8 894 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.32□□□□□ -0.92
TMEM258-201ENST00000257262 CCDC65Q8IXS2 484 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 GRAMD1CQ8IYS0 662 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 CEP57L1Q8IYX8 460 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 RABGGTAQ92696 567 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 HPS3Q969F9 1004 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 TMEM169Q96HH4 297 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 ACAP3Q96P50 834 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 RPS6KC1Q96S38 1066 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 TCF25Q9BQ70 676 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 PYM1Q9BRP8 204 aaKnown RBP9.32□□□□□ -0.92
TMEM258-201ENST00000257262 CCDC94Q9BW85 323 aaPredicted RBP9.32□□□□□ -0.92
TMEM258-201ENST00000257262 FGFBP2Q9BYJ0 223 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 BLZF1Q9H2G9 400 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 IGFLR1Q9H665 355 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 MAGEF1Q9HAY2 307 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 OLFML3Q9NRN5 406 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 PRG3Q9Y2Y8 225 aaPredicted RBP9.32□□□□□ -0.92
TMEM258-201ENST00000257262 ZMYM2Q9UBW7 1377 aa9.32□□□□□ -0.92
TMEM258-201ENST00000257262 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.31□□□□□ -0.92
TMEM258-201ENST00000257262 FAM237AA0A1B0GTK4 181 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 SMIM28A0A1B0GU29 152 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 A0A1W2PQ27 194 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 A0A1W2PQ64 194 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 A0A1W2PQD8 194 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 HIDE1A8MVS5 230 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 TISP43B9A030 160 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 F8W810 466 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 FSCN2O14926 492 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 PER2O15055 1255 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 MEFVO15553 781 aaPredicted RBP9.31□□□□□ -0.92
TMEM258-201ENST00000257262 ACTN4O43707 911 aaKnown RBP9.31□□□□□ -0.92
TMEM258-201ENST00000257262 NR1I2O75469 434 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 GCNT3O95395 438 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 SLFN14P0C7P3 912 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 MYBP10242 640 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 ANP32AP39687 249 aaKnown RBP9.31□□□□□ -0.92
TMEM258-201ENST00000257262 TNFSF9P41273 254 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 NRIP1P48552 1158 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 ASIC1P78348 528 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 TFF2Q03403 129 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 KCNA1Q09470 495 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 COASYQ13057 564 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 TUSC3Q13454 348 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 CUL4BQ13620 913 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 NOLC1Q14978 699 aaKnown RBP eCLIP9.31□□□□□ -0.92
TMEM258-201ENST00000257262 SLC10A6Q3KNW5 377 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 XKR4Q5GH76 650 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 GLRA4Q5JXX5 417 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 L1TD1Q5T7N2 865 aaKnown RBP9.31□□□□□ -0.92
TMEM258-201ENST00000257262 PLPP4Q5VZY2 271 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 PDE12Q6L8Q7 609 aaKnown RBP9.31□□□□□ -0.92
TMEM258-201ENST00000257262 CNNM4Q6P4Q7 775 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 DDX53Q86TM3 631 aaKnown RBP9.31□□□□□ -0.92
TMEM258-201ENST00000257262 VPS52Q8N1B4 723 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 GLIS3Q8NEA6 775 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 HLA-CQ95604 372 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 HVCN1Q96D96 273 aa9.31□□□□□ -0.92
TMEM258-201ENST00000257262 PAGE5Q96GU1 130 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms