RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 TWF2Q6IBS0 349 aaKnown RBP16.76■□□□□ 0.27
SIN3B-201ENST00000248054 CYP3A7-CYP3A51PA0A087WV96 503 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 RRN3P2A6NIE6 340 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 CYP3A7P24462 503 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 SWT1Q5T5J6 900 aaKnown RBP16.76■□□□□ 0.27
SIN3B-201ENST00000248054 DARS2Q6PI48 645 aaKnown RBP16.76■□□□□ 0.27
SIN3B-201ENST00000248054 TPX2Q9ULW0 747 aaKnown RBP16.76■□□□□ 0.27
SIN3B-201ENST00000248054 AHDC1Q5TGY3 1603 aaPredicted RBP16.76■□□□□ 0.27
SIN3B-201ENST00000248054 SUPT20HL2P0C7V6 817 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 BTNL9Q6UXG8 535 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 BBS5Q8N3I7 341 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 SEMA6BQ9H3T3 888 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 CCL15-CCL14A0A0B4J2E2 113 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 ENO4A6NNW6 628 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 PLA2G6O60733 806 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 GARTP22102 1010 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 MDM2Q00987 491 aaPredicted RBP16.76■□□□□ 0.27
SIN3B-201ENST00000248054 CCL15Q16663 113 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 PRAMEF18Q5VWM3 479 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 THEM5Q8N1Q8 247 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 TRIM65Q6PJ69 517 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 PNMA5Q96PV4 448 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 LRRIQ3A6PVS8 624 aaPredicted RBP16.75■□□□□ 0.27
SIN3B-201ENST00000248054 TTC16Q8NEE8 873 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 TRIM4Q9C037 500 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 ALS2Q96Q42 1657 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 CYP26A1O43174 497 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 ZC3H11AO75152 810 aaKnown RBP eCLIP16.75■□□□□ 0.274e-7■■■■■ 41.2
SIN3B-201ENST00000248054 TGFB3P10600 412 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 SLC9A1P19634 815 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 FUT2Q10981 343 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 TAF1CQ15572 869 aaPredicted RBP16.75■□□□□ 0.27
SIN3B-201ENST00000248054 TATDN1Q6P1N9 297 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 TRAPPC11Q7Z392 1133 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 DHX38Q92620 1227 aaKnown RBP16.75■□□□□ 0.27
SIN3B-201ENST00000248054 NFU1Q9UMS0 254 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 PCDHB2Q9Y5E7 798 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 TNPO2O14787 897 aaKnown RBP16.75■□□□□ 0.27
SIN3B-201ENST00000248054 NAMPTP43490 491 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 RBP5P82980 135 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 CAPRIN2Q6IMN6 1127 aaKnown RBP16.75■□□□□ 0.27
SIN3B-201ENST00000248054 FBXO41Q8TF61 875 aa16.75■□□□□ 0.27
SIN3B-201ENST00000248054 INHBAP08476 426 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 PAX7P23759 505 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 YWHAGP61981 247 aaKnown RBP eCLIP16.74■□□□□ 0.27
SIN3B-201ENST00000248054 CENPUQ71F23 418 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 SPATA4Q8NEY3 305 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.74■□□□□ 0.27
SIN3B-201ENST00000248054 NFX1Q12986 1120 aaKnown RBP16.74■□□□□ 0.27
SIN3B-201ENST00000248054 TRAF3IP3Q9Y228 551 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 VWA5AO00534 786 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 PFDN6O15212 129 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 GALCP54803 685 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 NCOA4Q13772 614 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 PGM5Q15124 567 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 HSP90AA5PQ58FG0 334 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 ZNF720Q7Z2F6 126 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 ZFPM1Q8IX07 1006 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 NOA1Q8NC60 698 aaKnown RBP16.74■□□□□ 0.27
SIN3B-201ENST00000248054 HDAC6Q9UBN7 1215 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 IPO11Q9UI26 975 aaKnown RBP16.74■□□□□ 0.27
SIN3B-201ENST00000248054 NOC2LQ9Y3T9 749 aaKnown RBP16.74■□□□□ 0.27
SIN3B-201ENST00000248054 ZNF394Q53GI3 561 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 ZNF484Q5JVG2 852 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 TMC2Q8TDI7 906 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 SCFD1Q8WVM8 642 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 THOC1Q96FV9 657 aaKnown RBP16.74■□□□□ 0.27
SIN3B-201ENST00000248054 TRIM62Q9BVG3 475 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 THEGQ9P2T0 379 aa16.74■□□□□ 0.27
SIN3B-201ENST00000248054 NFIBO00712 420 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 RASGRF2O14827 1237 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 ACTN1P12814 892 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 BSPRYQ5W0U4 402 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 SYDE1Q6ZW31 735 aaPredicted RBP16.73■□□□□ 0.27
SIN3B-201ENST00000248054 PDIK1LQ8N165 341 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 AKT1S1Q96B36 256 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 ZFYVE28Q9HCC9 887 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 PFDN4Q9NQP4 134 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 TTLL3Q9Y4R7 772 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 NPEPPSP55786 919 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 TAF1DQ9H5J8 278 aaPredicted RBP16.73■□□□□ 0.27
SIN3B-201ENST00000248054 SEPT10Q9P0V9 454 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 ARHGAP42A6NI28 874 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 M0QYV0 167 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 TXNDC9O14530 226 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 PSMC1P62191 440 aaKnown RBP16.73■□□□□ 0.27
SIN3B-201ENST00000248054 CRYMQ14894 314 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 OTOP1Q7RTM1 612 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 ZNF507Q8TCN5 953 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 KIF12Q96FN5 646 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 TSC22D3Q99576 134 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 ANKZF1Q9H8Y5 726 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 KCNMB3Q9NPA1 279 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 ARFGEF2Q9Y6D5 1785 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 ZBED1O96006 694 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 SDC4P31431 198 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 GABPAQ06546 454 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 ASPHQ12797 758 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 NLRP14Q86W24 1093 aa16.73■□□□□ 0.27
SIN3B-201ENST00000248054 TCF7P36402 384 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms