RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 CPSF3Q9UKF6 684 aaKnown RBP21■□□□□ 0.95
SOX4-201ENST00000244745 ATP8B3O60423 1300 aa21■□□□□ 0.95
SOX4-201ENST00000244745 KCNQ2O43526 872 aa21■□□□□ 0.95
SOX4-201ENST00000244745 SDC4P31431 198 aa21■□□□□ 0.95
SOX4-201ENST00000244745 PGM1P36871 562 aa21■□□□□ 0.95
SOX4-201ENST00000244745 TNFAIP2Q03169 654 aa21■□□□□ 0.95
SOX4-201ENST00000244745 FAM102AQ5T9C2 384 aaPredicted RBP21■□□□□ 0.95
SOX4-201ENST00000244745 AGGF1Q8N302 714 aaeCLIP21■□□□□ 0.95
SOX4-201ENST00000244745 STAMBPL1Q96FJ0 436 aa21■□□□□ 0.95
SOX4-201ENST00000244745 GCOM2Q9BZD3 368 aaPredicted RBP21■□□□□ 0.95
SOX4-201ENST00000244745 FAM96AQ9H5X1 160 aa21■□□□□ 0.95
SOX4-201ENST00000244745 PAMP19021 973 aa21■□□□□ 0.95
SOX4-201ENST00000244745 ALDH18A1P54886 795 aaKnown RBP21■□□□□ 0.95
SOX4-201ENST00000244745 ERGIC2Q96RQ1 377 aa21■□□□□ 0.95
SOX4-201ENST00000244745 AP5M1Q9H0R1 490 aa21■□□□□ 0.95
SOX4-201ENST00000244745 RASA1P20936 1047 aa21■□□□□ 0.95
SOX4-201ENST00000244745 PMLP29590 882 aa21■□□□□ 0.95
SOX4-201ENST00000244745 ERFP50548 548 aa21■□□□□ 0.95
SOX4-201ENST00000244745 HERVK_113P62684 666 aa21■□□□□ 0.95
SOX4-201ENST00000244745 TMEM259Q4ZIN3 620 aa21■□□□□ 0.95
SOX4-201ENST00000244745 HEATR6Q6AI08 1181 aaKnown RBP21■□□□□ 0.95
SOX4-201ENST00000244745 DSTYKQ6XUX3 929 aa21■□□□□ 0.95
SOX4-201ENST00000244745 LBHD1Q9BQE6 289 aaPredicted RBP21■□□□□ 0.95
SOX4-201ENST00000244745 TRIM33Q9UPN9 1127 aa21■□□□□ 0.95
SOX4-201ENST00000244745 LRRN4CLQ8ND94 238 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 HSD17B3P37058 310 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 C16orf86Q6ZW13 317 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 KRT27Q7Z3Y8 459 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 ENO1P06733 434 aaKnown RBP20.99■□□□□ 0.95
SOX4-201ENST00000244745 ITIH2P19823 946 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 EIF3EP60228 445 aaKnown RBP20.99■□□□□ 0.95
SOX4-201ENST00000244745 KLHDC7AQ5VTJ3 777 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 RSPH3Q86UC2 560 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 C4orf33Q8N1A6 199 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 IGF2BP3O00425 579 aaKnown RBP eCLIP20.99■□□□□ 0.95
SOX4-201ENST00000244745 HSPA8P11142 646 aaKnown RBP20.99■□□□□ 0.95
SOX4-201ENST00000244745 PDHBP11177 359 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 KDM7AQ6ZMT4 941 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 FAM167AQ96KS9 214 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 FAM217BQ9NTX9 383 aaPredicted RBP20.99■□□□□ 0.95
SOX4-201ENST00000244745 DAGLAQ9Y4D2 1042 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 DIP2AQ14689 1571 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 CEP55Q53EZ4 464 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 RC3H1Q5TC82 1133 aaKnown RBP20.99■□□□□ 0.95
SOX4-201ENST00000244745 LDHDQ86WU2 507 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 RNF139Q8WU17 664 aa20.99■□□□□ 0.95
SOX4-201ENST00000244745 RBM15Q96T37 977 aaKnown RBP eCLIP20.99■□□□□ 0.95
SOX4-201ENST00000244745 PIK3R2O00459 728 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 COMTP21964 271 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 CDH6P55285 790 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 OCA2Q04671 838 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 PODNQ7Z5L7 613 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 RCOR2Q8IZ40 523 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 MDM1Q8TC05 714 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 C9orf72Q96LT7 481 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 UBN1Q9NPG3 1134 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 FXR2P51116 673 aaKnown RBP eCLIP20.98■□□□□ 0.95
SOX4-201ENST00000244745 BCAR1P56945 870 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 EDRF1Q3B7T1 1238 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 TMTC4Q5T4D3 741 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 CATSPER4Q7RTX7 472 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 KAZALD1Q96I82 304 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 MRPL4Q9BYD3 311 aaKnown RBP20.98■□□□□ 0.95
SOX4-201ENST00000244745 RTKN2Q8IZC4 609 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 UVRAGQ9P2Y5 699 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 ANKS1AQ92625 1134 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 OVOS2A0A0G2JMS6 1433 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 CDKL3Q8IVW4 592 aaPredicted RBP20.98■□□□□ 0.95
SOX4-201ENST00000244745 CCNYL1Q8N7R7 359 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 AGR3Q8TD06 166 aa20.98■□□□□ 0.95
SOX4-201ENST00000244745 CHEK2O96017 543 aa20.97■□□□□ 0.95
SOX4-201ENST00000244745 SMARCA1P28370 1054 aa20.97■□□□□ 0.95
SOX4-201ENST00000244745 PHKA2P46019 1235 aa20.97■□□□□ 0.95
SOX4-201ENST00000244745 DNAJC9Q8WXX5 260 aa20.97■□□□□ 0.95
SOX4-201ENST00000244745 CHORDC1Q9UHD1 332 aaPredicted RBP20.97■□□□□ 0.95
SOX4-201ENST00000244745 TAP1Q03518 808 aa20.97■□□□□ 0.95
SOX4-201ENST00000244745 NSUN2Q08J23 767 aaKnown RBP eCLIP20.97■□□□□ 0.95
SOX4-201ENST00000244745 ST3GAL1Q11201 340 aa20.97■□□□□ 0.95
SOX4-201ENST00000244745 CUL3Q13618 768 aa20.97■□□□□ 0.95
SOX4-201ENST00000244745 TMEM253P0C7T8 217 aa20.97■□□□□ 0.95
SOX4-201ENST00000244745 SYN2Q92777 582 aaPredicted RBP20.97■□□□□ 0.95
SOX4-201ENST00000244745 VCPKMTQ9H867 229 aa20.97■□□□□ 0.95
SOX4-201ENST00000244745 KDSRQ06136 332 aa20.97■□□□□ 0.95
SOX4-201ENST00000244745 ADA2Q9NZK5 511 aa20.97■□□□□ 0.95
SOX4-201ENST00000244745 APOL1O14791 398 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 CCDC22O60826 627 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 CAMTA2O94983 1202 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 ATXN7L3BQ96GX2 97 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 BTBD6Q96KE9 485 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 FSD1LQ9BXM9 530 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 EIF2AQ9BY44 585 aaKnown RBP20.96■□□□□ 0.95
SOX4-201ENST00000244745 DHX35Q9H5Z1 703 aaKnown RBP20.96■□□□□ 0.95
SOX4-201ENST00000244745 SUCLA2Q9P2R7 463 aaPredicted RBP20.96■□□□□ 0.95
SOX4-201ENST00000244745 TMEM120BA0PK00 339 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 ADORA2BP29275 332 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 NEU2Q9Y3R4 380 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 ZHX2Q9Y6X8 837 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 DEPDC5O75140 1603 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 CCDC92Q53HC0 331 aaPredicted RBP20.96■□□□□ 0.95
SOX4-201ENST00000244745 WDR93Q6P2C0 686 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms