RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 BPIFB4P59827 614 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 CNTN2Q02246 1040 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 TARBP2Q15633 366 aaKnown RBP17.35■□□□□ 0.37
UBE3D-201ENST00000237186 CYP1B1Q16678 543 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 CRELD2Q6UXH1 353 aaPredicted RBP17.35■□□□□ 0.37
UBE3D-201ENST00000237186 PROCA1Q8NCQ7 364 aaPredicted RBP17.35■□□□□ 0.37
UBE3D-201ENST00000237186 ASAP3Q8TDY4 903 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 ATP6V1G3Q96LB4 118 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 TMEM134Q9H6X4 195 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 AVENQ9NQS1 362 aaPredicted RBP17.35■□□□□ 0.37
UBE3D-201ENST00000237186 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.35■□□□□ 0.374e-6■■■■■ 111.8
UBE3D-201ENST00000237186 AGO2Q9UKV8 859 aaKnown RBP17.35■□□□□ 0.37
UBE3D-201ENST00000237186 PCDHB2Q9Y5E7 798 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 DICER1Q9UPY3 1922 aaKnown RBP17.35■□□□□ 0.37
UBE3D-201ENST00000237186 COL11A1P12107 1806 aaPredicted RBP17.35■□□□□ 0.37
UBE3D-201ENST00000237186 TGFB3P10600 412 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 PTGIRP43119 386 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 FSTL1Q12841 308 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 KDM7AQ6ZMT4 941 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 TMC3Q7Z5M5 1100 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 PRELID2Q8N945 189 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 SLC7A3Q8WY07 619 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 ZNF653Q96CK0 615 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 FNBP1Q96RU3 617 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 SYT17Q9BSW7 474 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 TXLNGYQ9BZA5 131 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 TMBIM4Q9HC24 238 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 PPME1Q9Y570 386 aa17.35■□□□□ 0.37
UBE3D-201ENST00000237186 GSTTP1A0A1W2PQM5 241 aa17.34■□□□□ 0.37
UBE3D-201ENST00000237186 K7ERI5 159 aa17.34■□□□□ 0.37
UBE3D-201ENST00000237186 MARCKSL1P49006 195 aa17.34■□□□□ 0.37
UBE3D-201ENST00000237186 NLRP11P59045 1033 aaKnown RBP17.34■□□□□ 0.37
UBE3D-201ENST00000237186 VGLL4Q14135 290 aa17.34■□□□□ 0.37
UBE3D-201ENST00000237186 WDR44Q5JSH3 913 aa17.34■□□□□ 0.37
UBE3D-201ENST00000237186 NAA35Q5VZE5 725 aa17.34■□□□□ 0.37
UBE3D-201ENST00000237186 TMEM143Q96AN5 459 aa17.34■□□□□ 0.37
UBE3D-201ENST00000237186 PCYT2Q99447 389 aa17.34■□□□□ 0.37
UBE3D-201ENST00000237186 HAPLN2Q9GZV7 340 aa17.34■□□□□ 0.37
UBE3D-201ENST00000237186 C1orf112Q9NSG2 853 aa17.34■□□□□ 0.37
UBE3D-201ENST00000237186 NRBP2Q9NSY0 501 aa17.34■□□□□ 0.37
UBE3D-201ENST00000237186 ZDHHC18Q9NUE0 388 aa17.34■□□□□ 0.37
UBE3D-201ENST00000237186 A0A0B4J269 797 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 PODXLO00592 558 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 EIF3HO15372 352 aaKnown RBP eCLIP17.33■□□□□ 0.37
UBE3D-201ENST00000237186 FARP2O94887 1054 aaPredicted RBP17.33■□□□□ 0.37
UBE3D-201ENST00000237186 MYBL1P10243 752 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 PYGMP11217 842 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 UBA1P22314 1058 aaKnown RBP17.33■□□□□ 0.37
UBE3D-201ENST00000237186 GBP1P32455 592 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 FLT3P36888 993 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 NEDD9Q14511 834 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 TREML2Q5T2D2 321 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 SEL1L2Q5TEA6 688 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 TDRD10Q5VZ19 366 aaKnown RBP17.33■□□□□ 0.37
UBE3D-201ENST00000237186 JAMLQ86YT9 394 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 ZDHHC14Q8IZN3 488 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 DEPTORQ8TB45 409 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 RUNDC3BQ96NL0 473 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 PI4K2AQ9BTU6 479 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 RNF181Q9P0P0 153 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 BTBD7Q9P203 1132 aa17.33■□□□□ 0.37
UBE3D-201ENST00000237186 CNOT8Q9UFF9 292 aaKnown RBP17.33■□□□□ 0.37
UBE3D-201ENST00000237186 CHORDC1Q9UHD1 332 aaPredicted RBP17.33■□□□□ 0.37
UBE3D-201ENST00000237186 GRIN2DO15399 1336 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 ADGRA2Q96PE1 1338 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 TMEM110-MUSTN1A8MSY1 372 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 TULP1O00294 542 aaPredicted RBP17.33■□□□□ 0.36
UBE3D-201ENST00000237186 ATMINO43313 823 aaPredicted RBP17.33■□□□□ 0.36
UBE3D-201ENST00000237186 PPFIA2O75334 1257 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 DDNO94850 711 aaPredicted RBP17.33■□□□□ 0.36
UBE3D-201ENST00000237186 HLA-DRAP01903 254 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 CYP1A1P04798 512 aaPredicted RBP17.33■□□□□ 0.36
UBE3D-201ENST00000237186 KRT5P13647 590 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 TNNI1P19237 187 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 ACO1P21399 889 aaKnown RBP17.33■□□□□ 0.36
UBE3D-201ENST00000237186 CEP85LQ5SZL2 805 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 AADACL2Q6P093 401 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 SEPT14Q6ZU15 432 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 SLC13A5Q86YT5 568 aaPredicted RBP17.33■□□□□ 0.36
UBE3D-201ENST00000237186 TRIM11Q96F44 468 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 TRIM51Q9BSJ1 452 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 RASAL2Q9UJF2 1139 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 CNTN6Q9UQ52 1028 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 SBF1O95248 1867 aa17.33■□□□□ 0.36
UBE3D-201ENST00000237186 LOC285556D6RIA3 1793 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 SOWAHBA6NEL2 793 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 SPOPO43791 374 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 SORBS3O60504 671 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 VNN1O95497 513 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 RWDD2BP57060 319 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 KCTD16Q68DU8 428 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 SMYD5Q6GMV2 418 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 FOXR1Q6PIV2 292 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 RUFY4Q6ZNE9 571 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 MCOLN2Q8IZK6 566 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 SH2D3CQ8N5H7 860 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 GLG1Q92896 1179 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 FMO2Q99518 471 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 DPH5Q9H2P9 285 aa17.32■□□□□ 0.36
UBE3D-201ENST00000237186 ARID2Q68CP9 1835 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms