RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 PTENP60484 403 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 ITIH3Q06033 890 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 C2orf54Q08AI8 447 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 BIRC3Q13489 604 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 BRD3Q15059 726 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 CC2D1AQ6P1N0 951 aaPredicted RBP18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 BRSK2Q8IWQ3 736 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 RFFLQ8WZ73 363 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 ZNF668Q96K58 619 aaPredicted RBP18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 FAM81BQ96LP2 452 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 TCHPQ9BT92 498 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 ISCUQ9H1K1 167 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 FZD8Q9H461 694 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 GOLPH3Q9H4A6 298 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 EHD2Q9NZN4 543 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 CPA4Q9UI42 421 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 CCDC151A5D8V7 595 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 ACKR2O00590 384 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 PPFIA4O75335 1185 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 TNFSF9P41273 254 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 MCL1Q07820 350 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 ACVR2BQ13705 512 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 DUSP28Q4G0W2 176 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 WDR44Q5JSH3 913 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 TAF3Q5VWG9 929 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 LINC01465Q8N7H1 131 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 SLC35G2Q8TBE7 412 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 LMBR1Q8WVP7 490 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 ARHGEF26Q96DR7 871 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 THAP2Q9H0W7 228 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 ABHD16BQ9H3Z7 469 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 SMARCAL1Q9NZC9 954 aa18.56■□□□□ 0.56
RABGGTA-201ENST00000216840 OGTO15294 1046 aa18.55■□□□□ 0.56
RABGGTA-201ENST00000216840 SEC31AO94979 1220 aaKnown RBP18.55■□□□□ 0.56
RABGGTA-201ENST00000216840 CYP11B1P15538 503 aa18.55■□□□□ 0.56
RABGGTA-201ENST00000216840 PROZP22891 400 aa18.55■□□□□ 0.56
RABGGTA-201ENST00000216840 FMO1Q01740 532 aa18.55■□□□□ 0.56
RABGGTA-201ENST00000216840 MBTD1Q05BQ5 628 aa18.55■□□□□ 0.56
RABGGTA-201ENST00000216840 CCDC181Q5TID7 509 aa18.55■□□□□ 0.56
RABGGTA-201ENST00000216840 TSHZ1Q6ZSZ6 1077 aa18.55■□□□□ 0.56
RABGGTA-201ENST00000216840 RASAL3Q86YV0 1011 aa18.55■□□□□ 0.56
RABGGTA-201ENST00000216840 OR5B17Q8NGF7 314 aa18.55■□□□□ 0.56
RABGGTA-201ENST00000216840 OSGEPQ9NPF4 335 aa18.55■□□□□ 0.56
RABGGTA-201ENST00000216840 COL1A2P08123 1366 aa18.55■□□□□ 0.56
RABGGTA-201ENST00000216840 FAM170AA1A519 330 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 INO80B-WBP1J3KQ70 363 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 IGF2BP3O00425 579 aaKnown RBP eCLIP18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 MAGEB2O15479 319 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 KIF4AO95239 1232 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 FTLP02792 175 aaPredicted RBP18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 MMEP08473 750 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 DNA2P51530 1060 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 RPS6KA1Q15418 735 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 MMGT1Q8N4V1 131 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 SPATA4Q8NEY3 305 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 MS4A14Q96JA4 679 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 INO80BQ9C086 356 aaPredicted RBP18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 MINDY3Q9H8M7 445 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 PTPRHQ9HD43 1115 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 RNF14Q9UBS8 474 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 ZHX1Q9UKY1 873 aaPredicted RBP18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 STXBP5LQ9Y2K9 1186 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 ANK1P16157 1881 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 RTN2O75298 545 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 GZMAP12544 262 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 HOXD8P13378 290 aaPredicted RBP18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 PAFAH1B1P43034 410 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 CDR2Q01850 454 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 GRM1Q13255 1194 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 SPOPLQ6IQ16 392 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 DDX1Q92499 740 aaKnown RBP18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 NFKBIZQ9BYH8 718 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 CPSF3Q9UKF6 684 aaKnown RBP18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 KAT6AQ92794 2004 aa18.54■□□□□ 0.56
RABGGTA-201ENST00000216840 H3BRB1 525 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 B4GALT5O43286 388 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 MMP3P08254 477 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 KRT5P13647 590 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 PDE6CP51160 858 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 VSNL1P62760 191 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 CFAP221Q4G0U5 840 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 MORN1Q5T089 497 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 ATF7IP2Q5U623 682 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 IQSEC1Q6DN90 963 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 MPZL3Q6UWV2 235 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 SYCE1Q8N0S2 351 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 OR6J1Q8NGC5 347 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 TUT1Q9H6E5 874 aaKnown RBP18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 IFT122Q9HBG6 1241 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 APOBEC3GQ9HC16 384 aaKnown RBP18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 ARFGAP3Q9NP61 516 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 RNF216Q9NWF9 866 aaPredicted RBP18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 MGAMO43451 1857 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 ADCY6O43306 1168 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 TUBBP07437 444 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 IQCF3P0C7M6 154 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 ZNF157P51786 506 aaPredicted RBP18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 POU5F1BQ06416 359 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 EEF1DP3Q658K8 133 aa18.53■□□□□ 0.56
RABGGTA-201ENST00000216840 WDR93Q6P2C0 686 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms