RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 FKBP1AP62942 108 aaKnown RBP11.75□□□□□ -0.53
RGPD5-201ENST00000016946 SYTL5Q8TDW5 730 aaPredicted RBP11.75□□□□□ -0.53
RGPD5-201ENST00000016946 EXT2Q93063 718 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 CLCN3P51790 818 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 ATN1P54259 1190 aaPredicted RBP11.75□□□□□ -0.53
RGPD5-201ENST00000016946 SATB1Q01826 763 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 ARID5BQ14865 1188 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 CDR2LQ86X02 465 aaPredicted RBP11.75□□□□□ -0.53
RGPD5-201ENST00000016946 RSRC1Q96IZ7 334 aaKnown RBP11.75□□□□□ -0.53
RGPD5-201ENST00000016946 NFIBO00712 420 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 SRGAP2O75044 1071 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 CASP7P55210 303 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 AP1B1Q10567 949 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 ZNF211Q13398 564 aaPredicted RBP11.75□□□□□ -0.53
RGPD5-201ENST00000016946 DRP2Q13474 957 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 TRIM67Q6ZTA4 783 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 BCAS4Q8TDM0 211 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 FAM49BQ9NUQ9 324 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.75□□□□□ -0.53
RGPD5-201ENST00000016946 DNERQ8NFT8 737 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.75□□□□□ -0.53
RGPD5-201ENST00000016946 RMDN1Q96DB5 314 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 PKNOX2Q96KN3 472 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 KPNA6O60684 536 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 SUN1O94901 812 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 ACSL3O95573 720 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 GLE1Q53GS7 698 aaKnown RBP11.75□□□□□ -0.53
RGPD5-201ENST00000016946 METTL7BQ6UX53 244 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 WNT8AQ9H1J5 351 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 ARP10275 920 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 CCT5P48643 541 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 ROR1Q01973 937 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 SRRM1Q8IYB3 904 aaKnown RBP11.74□□□□□ -0.53
RGPD5-201ENST00000016946 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
RGPD5-201ENST00000016946 P4HA2O15460 535 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 SLC37A4O43826 429 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 RTN2O75298 545 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 CASP2P42575 452 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 TTC31Q49AM3 519 aaPredicted RBP11.74□□□□□ -0.53
RGPD5-201ENST00000016946 PID1Q7Z2X4 250 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 SLITRK1Q96PX8 696 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 TMEM8AQ9HCN3 771 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 CCDC151A5D8V7 595 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 PPP1R12AO14974 1030 aaPredicted RBP11.74□□□□□ -0.53
RGPD5-201ENST00000016946 MUTP22033 750 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 PRAMEP78395 509 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 ZKSCAN8Q15776 578 aaPredicted RBP11.74□□□□□ -0.53
RGPD5-201ENST00000016946 P2RX7Q99572 595 aaKnown RBP11.74□□□□□ -0.53
RGPD5-201ENST00000016946 KIF2CQ99661 725 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 NVLO15381 856 aaKnown RBP11.74□□□□□ -0.53
RGPD5-201ENST00000016946 SLC1A1P43005 524 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 CAV1Q03135 178 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 APOBEC3HQ6NTF7 200 aaKnown RBP11.74□□□□□ -0.53
RGPD5-201ENST00000016946 TRIM59Q8IWR1 403 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 CFAP61Q8NHU2 1237 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 CDC26Q8NHZ8 85 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 CAPN11Q9UMQ6 739 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 DFFAO00273 331 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 UCHL3P15374 230 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 SSTR3P32745 418 aaPredicted RBP11.74□□□□□ -0.53
RGPD5-201ENST00000016946 EMBQ6PCB8 327 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 ATP11BQ9Y2G3 1177 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 CASQ2O14958 399 aaPredicted RBP11.74□□□□□ -0.53
RGPD5-201ENST00000016946 HMBSP08397 361 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 ACADSBP45954 432 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 PCNX4Q63HM2 1172 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 FRA10AC1Q70Z53 315 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 CD302Q8IX05 232 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 SYT2Q8N9I0 419 aaPredicted RBP11.74□□□□□ -0.53
RGPD5-201ENST00000016946 UVRAGQ9P2Y5 699 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 TBX20Q9UMR3 447 aa11.74□□□□□ -0.53
RGPD5-201ENST00000016946 CTDNEP1O95476 244 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 CHRNA3P32297 505 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 OAZ1P54368 228 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 IRX4P78413 519 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 MAPRE1Q15691 268 aaKnown RBP11.73□□□□□ -0.53
RGPD5-201ENST00000016946 PHLDB3Q6NSJ2 640 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 LMNTD2Q8IXW0 634 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 TTC7AQ9ULT0 858 aaPredicted RBP11.73□□□□□ -0.53
RGPD5-201ENST00000016946 ARHGAP23Q9P227 1491 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 VWA5AO00534 786 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 OGTO15294 1046 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 ATP8B1O43520 1251 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 TRPA1O75762 1119 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 KLRC1P26715 233 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 GNL1P36915 607 aaPredicted RBP11.73□□□□□ -0.53
RGPD5-201ENST00000016946 MMS22LQ6ZRQ5 1243 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 DPF3Q92784 378 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 PXMP2Q9NR77 195 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 PCDHB2Q9Y5E7 798 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 ALDH1A3P47895 512 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 OR6P1Q8NGX9 317 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 HPDLQ96IR7 371 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 NFU1Q9UMS0 254 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 SH3BP1Q9Y3L3 701 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 ADGRG1Q9Y653 693 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 APOL1O14791 398 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 SLC7A5Q01650 507 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 SEC23AQ15436 765 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 EFHBQ8N7U6 833 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms