RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 SfnO70456 248 aaKnown RBP11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Dync1i2O88487 612 aaKnown RBP11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Axin2O88566 840 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Pik3caP42337 1068 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 PklrP53657 574 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Col9a2Q07643 688 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Edem3Q2HXL6 931 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Prpf38bQ80SY5 542 aaKnown RBP11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Rusc1Q8BG26 893 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Eif4bQ8BGD9 611 aaKnown RBP11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 AsphQ8BSY0 741 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Serpinb13Q8CDC0 389 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Pkn3Q8K045 878 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Psma8Q9CWH6 250 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Mipol1Q9D9F8 279 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Rnf138rt1Q9D9M9 248 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Olr1Q9EQ09 363 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Slc15a2Q9ES07 729 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Rnf4Q9QZS2 194 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Osbpl7A2A716 963 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Skor2A7M7C7 1008 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Fam71aB7XG49 585 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Ccdc144bE9PVZ3 520 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Fam207aP58468 219 aaKnown RBP11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Pla2g6P97819 807 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Agbl1Q09M05 972 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Znf367Q0VDT2 340 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 MlxipQ2VPU4 917 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Ccdc160Q3UYG1 323 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Styk1Q6J9G1 429 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Ano5Q75UR0 904 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Rimbp2Q80U40 1072 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Depdc1bQ8BH88 529 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Gpr150Q8BL07 427 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 TbckQ8BM85 762 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Klhl7Q8BUL5 586 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Lin9Q8C735 542 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Kat5Q8CHK4 513 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Ttc8Q8VD72 515 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Rpa1Q8VEE4 623 aaKnown RBP11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Nmrk1Q91W63 195 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Dnajc18Q9CZJ9 357 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Acsl3Q9CZW4 720 aaKnown RBP11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 SisF8VQM5 1818 aa11.23□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Apba1B2RUJ5 842 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 4930544D05RikJ3QK56 214 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 ChkbO55229 394 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Slc3a2P10852 526 aaKnown RBP11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Irf8P23611 424 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 AdssP46664 456 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Sox13Q04891 613 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Skap2Q3UND0 358 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Garnl3Q3V0G7 1038 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Spdye4aQ5IBH6 268 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 HnrnpdQ60668 355 aaKnown RBP11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Znf513Q6PD29 541 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Daam2Q80U19 1115 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Llgl1Q80Y17 1036 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 NrcamQ810U4 1256 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Trim65Q8BFW4 522 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Ublcp1Q8BGR9 318 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Tmem117Q8BH18 514 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 E330017A01RikQ8BU47 192 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Ttc16Q8C1F5 767 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Pop1Q8K205 1045 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Coq6Q8R1S0 476 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Nup58Q8R332 587 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Pex19Q8VCI5 299 aa11.22□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Gm9774A0A0A6YVU8 407 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Sec24cG3X972 1096 aaKnown RBP11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 MttpO08601 894 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Cd70O55237 195 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Hspa9P38647 679 aaKnown RBP11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Atp8a1P70704 1164 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Tarbp2P97473 365 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Trip13Q3UA06 432 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Dzip1lQ499E4 774 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Orc2Q60862 576 aaKnown RBP11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Nucks1Q80XU3 234 aaKnown RBP11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Usp38Q8BW70 1042 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Tmem161bQ8C2L6 487 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Ctnnbl1Q9CWL8 563 aaKnown RBP11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Cuedc2Q9CXX9 284 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Serpina9Q9D7D2 418 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Adrm1Q9JKV1 407 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Rnf103Q9R1W3 683 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Pacsin2Q9WVE8 486 aaKnown RBP11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Atp6v1c1Q9Z1G3 382 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Kank3Q9Z1P7 791 aa11.21□□□□□ -0.61
Ptpre-208ENSMUST00000211788 Gm11549A0A286YD83 63 aa11.21□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Gm6685D3YYP3 228 aa11.21□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Vmn2r63E9Q0K5 859 aa11.21□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Gm9268E9Q0M3 861 aa11.21□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Vmn2r62K7N712 859 aa11.21□□□□□ -0.62
Ptpre-208ENSMUST00000211788 CraddO88843 199 aa11.21□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Magea6O89010 325 aa11.21□□□□□ -0.62
Ptpre-208ENSMUST00000211788 PrkceP16054 737 aa11.21□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Ap1m1P35585 423 aa11.21□□□□□ -0.62
Ptpre-208ENSMUST00000211788 Syt2P46097 422 aa11.21□□□□□ -0.62
Ptpre-208ENSMUST00000211788 LeprP48356 1162 aa11.21□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms