RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Sema3dQ8BH34 777 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Ppm1lQ8BHN0 360 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Fam161bQ8CB59 589 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Rtn1Q8K0T0 780 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Prl7c1Q9CRB5 251 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Q9D2Q3 444 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Crlf3Q9Z2L7 442 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Gm28036V9GXJ1 658 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Zfp626A0A0U1RQ84 676 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Kif28pD3YXS5 1028 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Ttc17E9PVB5 1198 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 C130060K24RikG3UWA8 416 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Vmn2r78K7N6U5 853 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Mapkapk5O54992 473 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 VcpQ01853 806 aaKnown RBP12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 ScinQ60604 715 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Als2clQ60I26 952 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Ptk6Q64434 451 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Armcx3Q8BHS6 379 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Ticam2Q8BJQ4 232 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Pnpt1Q8K1R3 783 aaKnown RBP12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Grk2Q99MK8 689 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 PpidQ9CR16 370 aaKnown RBP12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Golph3Q9CRA5 298 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Ttc14Q9CSP9 761 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Hyou1Q9JKR6 999 aaKnown RBP12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Ehd1Q9WVK4 534 aaKnown RBP12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Camta1A2A891 1682 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Gm4297D3YWB7 211 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Kifc3O35231 824 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Slc22a8O88909 537 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Ulk3Q3U3Q1 472 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 MyrfQ3UR85 1138 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Ip6k2Q80V72 448 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Ccdc15Q8C9M2 810 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Pcdhga4Q91XY4 930 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Pcdhb22Q91XZ8 794 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 PccaQ91ZA3 724 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 GsdmcQ99NB5 468 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Arhgef25Q9CWR0 618 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Myo1hQ9D6A1 958 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Borcs5Q9D920 195 aa12.65□□□□□ -0.38
Bdnf-205ENSMUST00000111045 Sos2Q02384 1333 aa12.65□□□□□ -0.39
Bdnf-205ENSMUST00000111045 4921501E09RikA0A0R4J054 908 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Cdr2lA2A6T1 465 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Pde8bE9Q4S1 865 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Gucy1a2F8VQK3 730 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Asna1O54984 348 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Il7P10168 154 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Msr1P30204 458 aaKnown RBP12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 SrprbP47758 269 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Slc7a1Q09143 622 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Krt32Q62168 407 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Ddx55Q6ZPL9 600 aaKnown RBP12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Nme8Q715T0 586 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Slc6a15Q8BG16 729 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 LnpepQ8C129 1025 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Pacs1Q8K212 961 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Uckl1Q91YL3 548 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Q922M7 232 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Q9D5Q8 446 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Eid1Q9DCR4 169 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Rpf2Q9JJ80 306 aaKnown RBP12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Phtf1Q9QZ09 761 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Apol6B7ZC55 329 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Krt83E9Q1Y9 479 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 KitP05532 979 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 GzmgP13366 248 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Prl3d1P18121 224 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 ProcP33587 460 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Flt3Q00342 1000 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Pfdn6Q03958 127 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Ptgs2Q05769 604 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 MamstrQ0ZCJ7 421 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Ppp1r13bQ62415 1087 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Bnip1Q6QD59 228 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Olfr792Q7TRH9 311 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Gabbr2Q80T41 940 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Phactr3Q8BYK5 558 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 St5Q924W7 1134 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Thap12Q9CUX1 758 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 RictorQ6QI06 1708 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Gm13941A2AJ38 245 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Qtrt2B8ZXI1 415 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Pcdhb9E9Q5G2 828 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Kbtbd2G3X9X1 623 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Timm44O35857 452 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Abcb4P21440 1276 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Ftl1P29391 183 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Sycp3P70281 254 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Prickle1Q3U5C7 832 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Upf3bQ3ULL6 472 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Ppp4r3cQ3V0Y1 813 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Ppp1r13lQ5I1X5 824 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Q810N5 247 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 C130026I21RikQ8C898 291 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 FtcdQ91XD4 541 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Itgb3bpQ9CQ82 176 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Ppp1r2Q9DCL8 206 aa12.64□□□□□ -0.39
Bdnf-205ENSMUST00000111045 Nup50Q9JIH2 466 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms