RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 P4ha1Q60715 534 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Ctnna2Q61301 953 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 AlcamQ61490 583 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Msantd2Q6NZR2 559 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Inpp4bQ6P1Y8 924 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 PicalmQ7M6Y3 660 aaKnown RBP19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 TbataQ7TSD4 393 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Ints8Q80V86 995 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Rusc1Q8BG26 893 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 PreplQ8C167 725 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Dlk2Q8K1E3 382 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Champ1Q8K327 802 aaKnown RBP19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 OtoaQ8K561 1137 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Zcchc18Q8VD24 393 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Snx24Q9CRB0 169 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Twf2Q9Z0P5 349 aaKnown RBP19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Astn1Q61137 1302 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Skor2A7M7C7 1008 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Gm3127E9Q9P5 263 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Gm3453K7N724 263 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Eftud2O08810 971 aaKnown RBP19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Krt8P11679 490 aaKnown RBP19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Cyp11b2P15539 500 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Stmn4P63042 189 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Tex35Q14BK3 207 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 SpertQ32MG2 446 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Gm1587Q3UT80 123 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Klra3Q64329 266 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Nipa1Q8BHK1 323 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Fsd1lQ8BYN5 507 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Efl1Q8C0D5 1127 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Atp2a1Q8R429 994 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Slc25a38Q91XD8 326 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Gimap3Q99MI6 301 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Grk1Q9WVL4 564 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Gm8994E9PV04 411 aaKnown RBP19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 AunipE9Q6Z5 340 aa19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 Gm10436L7N1Y3 520 aa19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 4933427I04RikQ3V053 235 aa19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 BC051142Q3V0M8 400 aa19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 Tpd52Q62393 224 aa19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 Sh3gl3Q62421 347 aa19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 Zbed4Q80WQ9 1168 aa19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 Apol9bQ8C7I4 310 aa19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 Trpm8Q8R4D5 1104 aa19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 Apol9aQ8VDU3 310 aa19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 Grhl1Q921D9 618 aa19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 SarnpQ9D1J3 210 aaKnown RBP19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 Kcnh7Q9ER47 1195 aa19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 Mta2Q9R190 668 aa19.55■□□□□ 0.72
Trim47-202ENSMUST00000106441 Cpb1B2RS76 415 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Gm38392E9Q2A2 434 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Xrcc6P23475 608 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Abi2P62484 446 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Kcna2P63141 499 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Acot6Q32Q92 419 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Q3TTJ4 293 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Vwa3aQ3UVV9 1148 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Gm10488Q4KL05 212 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Slc14a1Q8VHL0 384 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Znf687Q9D2D7 1237 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 ErmapQ9JLN5 566 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Lamb2Q61292 1799 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Gm4297D3YWB7 211 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Cep126Q0VBV7 1103 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 MlxipQ2VPU4 917 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Fdxacb1Q3UY23 622 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Klra6Q60653 266 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Ssxb10Q6XAR7 170 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Btnl9Q8BJE2 536 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 L3mbtl3Q8BLB7 883 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Hook3Q8BUK6 718 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Lrrc4cQ8C031 640 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Bcas3Q8CCN5 928 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Dgcr8Q9EQM6 773 aa19.54■□□□□ 0.72
Trim47-202ENSMUST00000106441 Cfap221A9Q751 836 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Cd68P31996 326 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Casp4P70343 373 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Ttc39dQ0VF76 604 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Cyp11b1Q3TG86 501 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Mtus1Q5HZI1 1210 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Moxd2Q7TT41 619 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Gcfc2Q8BKT3 769 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Cd2bp2Q9CWK3 342 aaKnown RBP19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Xab2Q9DCD2 855 aaKnown RBP19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Rtn3Q9ES97 964 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Tlr5Q9JLF7 859 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Sbf1Q6ZPE2 1867 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Serpinb8O08800 374 aaKnown RBP19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Pex5O09012 639 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Casq2O09161 415 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Psmc4P54775 418 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 KhsrpQ3U0V1 748 aaKnown RBP19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Tfe3Q64092 572 aaKnown RBP19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Nlrp4fQ66X05 959 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 LnpkQ7TQ95 425 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Sh3d21Q7TSG5 549 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Bicd1Q8BR07 835 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Kiaa0391Q8JZY4 584 aaKnown RBP19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Leng1Q9DB98 261 aa19.53■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms