RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Slc4a7Q8BTY2 1034 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Col23a1Q8K4G2 532 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 NptxrQ99J85 493 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Rnf135Q9CWS1 417 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Fam187aQ9D3R5 417 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Usp21Q9QZL6 566 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Grk1Q9WVL4 564 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Fer1l6E0CZ42 1862 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Kif13bA0A286YCV9 1847 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Mocs3A2BDX3 460 aaKnown RBP10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gm5814J3QP80 125 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Rrm1P07742 792 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Pdha1P35486 390 aaKnown RBP10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Mybl1P51960 751 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Stmn2P55821 179 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Lrrn4P59383 733 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Yy1Q00899 414 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Pou6f1Q07916 301 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Tex11Q14AT2 947 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Brd9Q3UQU0 596 aaKnown RBP10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Syne3Q4FZC9 975 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Six2Q62232 296 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Zdhhc24Q6IR37 284 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Znf365Q8BG89 408 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 AarsQ8BGQ7 968 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Dennd1aQ8K382 1016 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Dnajc3Q91YW3 504 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Mrfap1Q9CQL7 125 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Cuedc2Q9CXX9 284 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Snf8Q9CZ28 258 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Thumpd2Q9CZB3 528 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ifi202Q9R002 445 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Fem1bQ9Z2G0 627 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Rgs9bpQ148R9 237 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ifnl2Q4VK74 193 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Dsg1aQ61495 1057 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Stambpl1Q76N33 436 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Lrrc4cQ8C031 640 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Leg1Q8C6C9 337 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Cd300ldQ8VCH2 221 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Akr1c14Q91WT7 323 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Kcnq4Q9JK97 696 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Fam205aA2APU8 1308 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 6030498E09RikB1AX85 169 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Olfr310B2RVZ1 332 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Zfp839E9PUU5 921 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ttc17E9PVB5 1198 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Casq2O09161 415 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Nptx2O70340 429 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 En2P09066 324 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 SkiQ60698 725 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 OcrlQ6NVF0 900 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Kbtbd3Q8BHI4 607 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Fbxl13Q8CDU4 790 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Smtnl2Q8CI12 456 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Pomgnt1Q91X88 660 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Lpgat1Q91YX5 370 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rev1Q920Q2 1249 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Txnrd2Q9JLT4 524 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 CtsfQ9R013 462 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Slfn14V9GXG1 899 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Astn1Q61137 1302 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Patl2A2ARM1 529 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Arhgap42B2RQE8 841 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Atp2a2O55143 1044 aaKnown RBP10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Kif5aP33175 1027 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 UrosP51163 265 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ephb2P54763 986 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Gpr156Q6PCP7 798 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Pja2Q80U04 707 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Inpp5fQ8CDA1 1132 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Mboat7Q8CHK3 473 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Fam20aQ8CID3 541 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 HibchQ8QZS1 385 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Wrap53Q8VC51 532 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Slc14a1Q8VHL0 384 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Tlr3Q99MB1 905 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Asb11Q9CQ31 323 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Bbs5Q9CZQ9 341 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Riok3Q9DBU3 519 aaKnown RBP10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cdr2lA2A6T1 465 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Gm13084A2A8N0 494 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Itpripl1A2ASA8 547 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 TyrobpO54885 114 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Hcls1P49710 486 aaKnown RBP10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Sem1P60897 70 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Aars2Q14CH7 980 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Arhgef18Q6P9R4 1021 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rhbdf1Q6PIX5 856 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Neto2Q8BNJ6 525 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 F11Q91Y47 624 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Trpc5Q9QX29 975 aa10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Gys1Q9Z1E4 738 aaKnown RBP10.33□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Col5a2Q3U962 1497 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Magea1O89006 320 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Magea5O89009 320 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Gnl1P36916 607 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Psmc5P62196 406 aa10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rps6P62754 249 aaKnown RBP10.32□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Vamp7P70280 220 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 64.2 ms