RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Prl2c3P04768 224 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Eif3eP60229 445 aaKnown RBP19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Atxn7l3bQ3UD01 97 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Klhl29Q80T74 875 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Znf579Q80VM4 562 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Fam118bQ8C569 351 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 DpydQ8CHR6 1025 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Ror2Q9Z138 944 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Rbm20Q3UQS8 1199 aaKnown RBP19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Pgm5Q8BZF8 567 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 BrdtQ91Y44 956 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Apobec3Q99J72 440 aaKnown RBP19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Git2Q9JLQ2 708 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Eif3dO70194 548 aaKnown RBP19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Slc8a1P70414 970 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Oog3Q3UWY1 500 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Bpifb6Q8BU51 449 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Vta1Q9CR26 309 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Q9D1F3 157 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Pramef12Q9D2F1 463 aa19.42■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Dcdc2bF7BCK0 340 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Nlrp4cQ3TKR3 982 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Znf746Q3U133 652 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Afg1lQ3V384 480 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Cyp2c29Q64458 490 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Ints2Q80UK8 1198 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Col23a1Q8K4G2 532 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Psma8Q9CWH6 250 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Rnf103Q9R1W3 683 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 HnrnpcQ9Z204 313 aaKnown RBP19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Sept5Q9Z2Q6 369 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Heatr9Q5QNV8 569 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 OafQ8QZR4 282 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Pqbp1Q91VJ5 263 aaKnown RBP19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Gm9774A0A0A6YVU8 407 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Zscan4-ps3A0A1B0GRH6 506 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Zscan4-ps2A0A1C7CYU6 506 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Fam129cD3YZB0 591 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Soat2O88908 525 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Gja3Q64448 417 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Ephx4Q6IE26 359 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Dusp4Q8BFV3 398 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Prr33Q8C494 260 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Rhobtb2Q91V93 728 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 FdpsQ920E5 353 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 SmtnQ921U8 923 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Scrn1Q9CZC8 414 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Trpv2Q9WTR1 756 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Rgs22G3UYX5 1258 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 DtnbO70585 659 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Fcer2P20693 331 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 NfibP97863 570 aaKnown RBP19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 MlphQ91V27 590 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Fgd4Q91ZT5 766 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Ola1Q9CZ30 396 aaKnown RBP19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Cog1Q9Z160 980 aa19.41■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Ctnnal1O88327 731 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Pdlim2Q8R1G6 349 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Dnajc28Q8VCE1 385 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Ugp2Q91ZJ5 508 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Chordc1Q9D1P4 331 aaKnown RBP19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Gm36210A0A1B0GS00 229 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Gap43P06837 227 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Serpinb10Q8K1K6 397 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Sugt1Q9CX34 336 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Mageb3Q9D2H4 330 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Peg12Q9WVA7 283 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Ehbp1l1Q99MS7 1716 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Mucl2P02815 138 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 PolgP54099 1218 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Plekhf1Q3TB82 279 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Cog7Q3UM29 770 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Usp20Q8C6M1 916 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 DtnaQ9D2N4 746 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 PpihQ9D868 188 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 S1pr4Q9Z0L1 386 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Adamts7Q68SA9 1657 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Prmt9Q3U3W5 846 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 PighQ5M9N4 188 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 B3galnt2Q8BG28 504 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Ppp1r11Q8K1L5 131 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Agap3Q8VHH5 910 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Tlr9Q9EQU3 1032 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Cdc42ep4Q9JM96 349 aaKnown RBP19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Sec23aQ01405 765 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 4931408C20RikE9PWP9 1381 aa19.4■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Mindy4b-psA0A1W2P7H6 457 aa19.39■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Apol11bE9PUZ0 337 aa19.39■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Gm3460E9QAI8 215 aa19.39■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Slc16a1P53986 493 aa19.39■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Zfp953Q3UPV7 304 aa19.39■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Zfp454Q80Y34 536 aa19.39■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Tmem145Q8C4U2 746 aa19.39■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Snx9Q91VH2 595 aa19.39■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Tspan3Q9QY33 253 aa19.39■□□□□ 0.7
Scaf11-201ENSMUST00000047835 Atp2c2A7L9Z8 944 aa19.39■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Cdh18E9Q9Q6 790 aa19.39■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Stam2O88811 523 aa19.39■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Nedd1P33215 660 aa19.39■□□□□ 0.69
Scaf11-201ENSMUST00000047835 Lig1P37913 916 aa19.39■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms