RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W SAM50P53969 484 aa1.41□□□□□ -2.18
CTF4YPR135W DIA1P54005 336 aa1.41□□□□□ -2.18
CTF4YPR135W DIG1Q03063 452 aaKnown RBP1.41□□□□□ -2.18
CTF4YPR135W BNA7Q04066 261 aa1.41□□□□□ -2.18
CTF4YPR135W API2Q04413 109 aa1.41□□□□□ -2.18
CTF4YPR135W LDB18Q07887 179 aa1.41□□□□□ -2.18
CTF4YPR135W MUM3Q08750 479 aa1.41□□□□□ -2.18
CTF4YPR135W GTT2Q12390 233 aa1.41□□□□□ -2.18
CTF4YPR135W CHA1P25379 360 aaKnown RBP1.41□□□□□ -2.18
CTF4YPR135W STP22P25604 385 aa1.41□□□□□ -2.18
CTF4YPR135W IES6P32617 166 aa1.41□□□□□ -2.18
CTF4YPR135W FRE2P36033 711 aa1.41□□□□□ -2.18
CTF4YPR135W YBR137WP38276 179 aa1.41□□□□□ -2.18
CTF4YPR135W YBP1P38315 674 aa1.41□□□□□ -2.18
CTF4YPR135W RTS2P40962 232 aa1.41□□□□□ -2.18
CTF4YPR135W CDH1P53197 566 aa1.41□□□□□ -2.18
CTF4YPR135W YNR048WP53740 393 aa1.41□□□□□ -2.18
CTF4YPR135W GAS3Q03655 524 aa1.41□□□□□ -2.18
CTF4YPR135W YDR222WQ04925 415 aa1.41□□□□□ -2.18
CTF4YPR135W REX4Q08237 289 aa1.41□□□□□ -2.18
CTF4YPR135W YLR112WQ12130 139 aa1.41□□□□□ -2.18
CTF4YPR135W YOP1Q12402 180 aa1.41□□□□□ -2.18
CTF4YPR135W SEY1Q99287 776 aa1.41□□□□□ -2.18
CTF4YPR135W NHP6BP11633 99 aaKnown RBP1.4□□□□□ -2.19
CTF4YPR135W CAP2P13517 287 aa1.4□□□□□ -2.19
CTF4YPR135W AIM17P23180 465 aaKnown RBP1.4□□□□□ -2.19
CTF4YPR135W EXG1P23776 448 aaKnown RBP1.4□□□□□ -2.19
CTF4YPR135W PUT3P25502 979 aaPredicted RBP1.4□□□□□ -2.19
CTF4YPR135W SEC1P30619 724 aaKnown RBP1.4□□□□□ -2.19
CTF4YPR135W ATS1P31386 333 aa1.4□□□□□ -2.19
CTF4YPR135W NPT1P39683 429 aaKnown RBP1.4□□□□□ -2.19
CTF4YPR135W SEN34P39707 275 aa1.4□□□□□ -2.19
CTF4YPR135W SMB1P40018 196 aaKnown RBP1.4□□□□□ -2.19
CTF4YPR135W PCL6P40038 420 aa1.4□□□□□ -2.19
CTF4YPR135W YNL194CP40169 301 aa1.4□□□□□ -2.19
CTF4YPR135W RFC4P40339 323 aaKnown RBP1.4□□□□□ -2.19
CTF4YPR135W UTP18P40362 594 aaPredicted RBP1.4□□□□□ -2.19
CTF4YPR135W MNN5P46982 586 aa1.4□□□□□ -2.19
CTF4YPR135W TIM13P53299 105 aa1.4□□□□□ -2.19
CTF4YPR135W RTT103Q05543 409 aa1.4□□□□□ -2.19
CTF4YPR135W VPS74Q06385 345 aa1.4□□□□□ -2.19
CTF4YPR135W ARR2Q06597 130 aa1.4□□□□□ -2.19
CTF4YPR135W BER1Q06688 274 aaKnown RBP1.4□□□□□ -2.19
CTF4YPR135W ASR1Q06834 288 aa1.4□□□□□ -2.19
CTF4YPR135W LOT6Q07923 191 aa1.4□□□□□ -2.19
CTF4YPR135W YEH2Q07950 538 aa1.4□□□□□ -2.19
CTF4YPR135W YLR108CQ12259 485 aa1.4□□□□□ -2.19
CTF4YPR135W NCA2Q12374 616 aa1.4□□□□□ -2.19
CTF4YPR135W BI3Q9ZZW7 517 aa1.4□□□□□ -2.19
CTF4YPR135W BPH1P25356 2167 aa1.4□□□□□ -2.19
CTF4YPR135W RPL31AP0C2H8 113 aaKnown RBP1.4□□□□□ -2.19
CTF4YPR135W KSS1P14681 368 aa1.4□□□□□ -2.19
CTF4YPR135W CBF1P17106 351 aa1.4□□□□□ -2.19
CTF4YPR135W POF1P25576 258 aa1.4□□□□□ -2.19
CTF4YPR135W VMA6P32366 345 aaKnown RBP1.4□□□□□ -2.19
CTF4YPR135W YBR241CP38142 488 aa1.4□□□□□ -2.19
CTF4YPR135W YBR096WP38256 230 aa1.4□□□□□ -2.19
CTF4YPR135W YPC1P38298 316 aa1.4□□□□□ -2.19
CTF4YPR135W ICE2P40499 491 aa1.4□□□□□ -2.19
CTF4YPR135W KEG1P43614 200 aa1.4□□□□□ -2.19
CTF4YPR135W COX16P47081 118 aa1.4□□□□□ -2.19
CTF4YPR135W NIF3P53081 288 aa1.4□□□□□ -2.19
CTF4YPR135W CTF19Q02732 369 aa1.4□□□□□ -2.19
CTF4YPR135W RPM2Q02773 1202 aa1.4□□□□□ -2.19
CTF4YPR135W LOA1Q06508 300 aa1.4□□□□□ -2.19
CTF4YPR135W YOR114WQ12219 294 aa1.4□□□□□ -2.19
CTF4YPR135W RPN6Q12377 434 aa1.4□□□□□ -2.19
CTF4YPR135W CMC2Q3E7A4 109 aa1.4□□□□□ -2.19
CTF4YPR135W Q0144Q9ZZW2 109 aa1.4□□□□□ -2.19
CTF4YPR135W YAR066WP0CX18 203 aa1.39□□□□□ -2.19
CTF4YPR135W YHR214WP0CX19 203 aa1.39□□□□□ -2.19
CTF4YPR135W NAM2P11325 894 aa1.39□□□□□ -2.19
CTF4YPR135W YMR31P19955 123 aa1.39□□□□□ -2.19
CTF4YPR135W YCR100CP25606 316 aa1.39□□□□□ -2.19
CTF4YPR135W TAH1P25638 111 aaPredicted RBP1.39□□□□□ -2.19
CTF4YPR135W RFA3P26755 122 aaKnown RBP1.39□□□□□ -2.19
CTF4YPR135W TIP1P27654 210 aaPredicted RBP1.39□□□□□ -2.19
CTF4YPR135W YEF1P32622 495 aa1.39□□□□□ -2.19
CTF4YPR135W COX13P32799 129 aa1.39□□□□□ -2.19
CTF4YPR135W GDH2P33327 1092 aaKnown RBP1.39□□□□□ -2.19
CTF4YPR135W MAK5P38112 773 aaPredicted RBP1.39□□□□□ -2.19
CTF4YPR135W RIM2P38127 377 aa1.39□□□□□ -2.19
CTF4YPR135W ARC40P38328 384 aaKnown RBP1.39□□□□□ -2.19
CTF4YPR135W AVT7P40501 490 aa1.39□□□□□ -2.19
CTF4YPR135W YIL054WP40524 105 aa1.39□□□□□ -2.19
CTF4YPR135W WWM1P43582 211 aaKnown RBP1.39□□□□□ -2.19
CTF4YPR135W LSG1P53145 640 aaKnown RBP1.39□□□□□ -2.19
CTF4YPR135W MTM1P53320 366 aa1.39□□□□□ -2.19
CTF4YPR135W CRZ1P53968 678 aa1.39□□□□□ -2.19
CTF4YPR135W PRP38Q00723 242 aaPredicted RBP1.39□□□□□ -2.19
CTF4YPR135W SPR6Q01684 191 aa1.39□□□□□ -2.19
CTF4YPR135W FMP42Q04991 504 aa1.39□□□□□ -2.19
CTF4YPR135W TAZ1Q06510 381 aa1.39□□□□□ -2.19
CTF4YPR135W YLR036CQ07986 203 aa1.39□□□□□ -2.19
CTF4YPR135W SLF1Q12034 447 aaKnown RBP1.39□□□□□ -2.19
CTF4YPR135W YPL150WQ12152 901 aa1.39□□□□□ -2.19
CTF4YPR135W IZH4Q99393 312 aa1.39□□□□□ -2.19
CTF4YPR135W QCR7P00128 127 aa1.39□□□□□ -2.19
CTF4YPR135W RPL24BP24000 155 aaKnown RBP1.39□□□□□ -2.19
CTF4YPR135W PHA2P32452 334 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms