RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	PAU3	P25610	124 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	YCR015C	P25616	317 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	IMG2	P25642	146 aa	Predicted RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	MIG1	P27705	504 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	MRP17	P28778	131 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	AAR2	P32357	355 aa	Predicted RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	CDC5	P32562	705 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	UTR5	P32630	166 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	TIM23	P32897	222 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	MNS1	P32906	549 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	ASK1	P35734	292 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	PMU1	P36069	295 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	OMA1	P36163	345 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	MRPL11	P36521	249 aa	Predicted RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	ASC1	P38011	319 aa	Known RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	YBR063C	P38083	404 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	BNA4	P38169	460 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	RTC2	P38279	296 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	NTC20	P38302	140 aa	Predicted RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	TSL1	P38427	1098 aa	Known RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	MGE1	P38523	228 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	YHR033W	P38690	423 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	HTD2	P38790	280 aa	Known RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	YHR122W	P38829	231 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	YHR177W	P38867	453 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	CHL4	P38907	458 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	SEC72	P39742	193 aa	Known RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	GDI1	P39958	451 aa	Known RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	RRG9	P40156	214 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	OSW5	P40219	148 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	YIL060W	P40519	144 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	FKH2	P41813	862 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	RMD8	P43620	662 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	YJL163C	P46996	555 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	YJL132W	P47014	750 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	MTR3	P48240	250 aa	Predicted RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	BUL1	P48524	976 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	SCS3	P53012	380 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	MGA1	P53050	456 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	DUO1	P53168	247 aa	Known RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	BOR1	P53838	576 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	ACT1	P60010	375 aa	Known RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	TPS1	Q00764	495 aa	Known RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	RSM23	Q01163	450 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	YKR011C	Q02209	353 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	YPL077C	Q02831	240 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	ELC1	Q03071	99 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	YMR087W	Q04299	284 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	AIM33	Q04516	312 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	ROY1	Q04847	553 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	HRD3	Q05787	833 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	CUR1	Q06469	252 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	CTR3	Q06686	241 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	PUN1	Q06991	263 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	HEM25	Q07534	307 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	AAD4	Q07747	329 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	PAU23	Q07987	124 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	CSI2	Q08054	341 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	PLB3	Q08108	686 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	THP1	Q08231	455 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	2.42	□□□□□ -2.02	not detected
LCL1	YPL056C	GPB1	Q08886	897 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	GRE1	Q08969	168 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	YDR056C	Q12025	205 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	FSF1	Q12029	327 aa	Known RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	ATG41	Q12048	136 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	NUS1	Q12063	375 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	PRR2	Q12310	699 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	YOL114C	Q12322	202 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	JLP1	Q12358	412 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	PAU17	Q12370	124 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	PDH1	Q12428	516 aa	Known RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	FRE6	Q12473	712 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	RPL13A	Q12690	199 aa	Predicted RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	YDR524C-B	Q3E6R4	66 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	RPS25A	Q3E792	108 aa	Predicted RBP	2.42	□□□□□ -2.02
LCL1	YPL056C	YLR099W-A	Q3E798	87 aa		2.42	□□□□□ -2.02
LCL1	YPL056C	TDH2	P00358	332 aa	Known RBP	2.41	□□□□□ -2.02
LCL1	YPL056C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.41	□□□□□ -2.02	not detected
LCL1	YPL056C	COX6	P00427	148 aa		2.41	□□□□□ -2.02
LCL1	YPL056C	HIS1	P00498	297 aa	Known RBP	2.41	□□□□□ -2.02
LCL1	YPL056C	RPS31	P05759	152 aa	Known RBP	2.41	□□□□□ -2.02
LCL1	YPL056C	GAL7	P08431	366 aa		2.41	□□□□□ -2.02
LCL1	YPL056C	UBI4	P0CG63	381 aa	Known RBP	2.41	□□□□□ -2.02
LCL1	YPL056C	RPL40A	P0CH08	128 aa	Known RBP	2.41	□□□□□ -2.02
LCL1	YPL056C	RPL40B	P0CH09	128 aa	Known RBP	2.41	□□□□□ -2.02
LCL1	YPL056C	TFS1	P14306	219 aa		2.41	□□□□□ -2.02
LCL1	YPL056C	BGL2	P15703	313 aa	Known RBP	2.41	□□□□□ -2.02
LCL1	YPL056C	ART10	P18634	518 aa	Known RBP	2.41	□□□□□ -2.02
LCL1	YPL056C	RBK1	P25332	333 aa		2.41	□□□□□ -2.02
LCL1	YPL056C	YCR090C	P25654	182 aa	Known RBP	2.41	□□□□□ -2.02
LCL1	YPL056C	YCR099C	P25657	155 aa		2.41	□□□□□ -2.02
LCL1	YPL056C	URK1	P27515	501 aa		2.41	□□□□□ -2.02
LCL1	YPL056C	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.41	□□□□□ -2.02	not detected
LCL1	YPL056C	POP5	P28005	173 aa		2.41	□□□□□ -2.02
LCL1	YPL056C	ERG3	P32353	365 aa		2.41	□□□□□ -2.02
LCL1	YPL056C	NTH1	P32356	751 aa		2.41	□□□□□ -2.02
LCL1	YPL056C	SRB5	P32585	307 aa		2.41	□□□□□ -2.02
LCL1	YPL056C	COT1	P32798	439 aa		2.41	□□□□□ -2.02
LCL1	YPL056C	MCH2	P36032	473 aa		2.41	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms