RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C MEH1Q02205 184 aa4.78□□□□□ -1.64
RAT1YOR048C YDR102CQ03864 110 aa4.78□□□□□ -1.64
RAT1YOR048C HMS1Q12398 434 aa4.78□□□□□ -1.64
RAT1YOR048C PUT1P09368 476 aa4.77□□□□□ -1.65
RAT1YOR048C YML003WP0CF16 290 aa4.77□□□□□ -1.65
RAT1YOR048C URA6P15700 204 aa4.77□□□□□ -1.65
RAT1YOR048C APA2P22108 325 aa4.77□□□□□ -1.65
RAT1YOR048C RPD3P32561 433 aa4.77□□□□□ -1.65
RAT1YOR048C SPT10P35208 640 aa4.77□□□□□ -1.65
RAT1YOR048C BET3P36149 193 aa4.77□□□□□ -1.65
RAT1YOR048C ASP1P38986 381 aaPredicted RBP4.77□□□□□ -1.65
RAT1YOR048C YIL067CP40514 678 aa4.77□□□□□ -1.65
RAT1YOR048C VMA21P41806 77 aa4.77□□□□□ -1.65
RAT1YOR048C SNO3P43544 222 aa4.77□□□□□ -1.65
RAT1YOR048C SOK2P53438 785 aaPredicted RBP4.77□□□□□ -1.65
RAT1YOR048C LEE1Q02799 301 aaKnown RBP4.77□□□□□ -1.65
RAT1YOR048C EKI1Q03764 534 aa4.77□□□□□ -1.65
RAT1YOR048C LRS4Q04087 347 aaKnown RBP4.77□□□□□ -1.65
RAT1YOR048C VBA4Q04602 768 aaKnown RBP4.77□□□□□ -1.65
RAT1YOR048C MRX8Q05473 314 aa4.77□□□□□ -1.65
RAT1YOR048C SNT309Q06091 175 aaPredicted RBP4.77□□□□□ -1.65
RAT1YOR048C YOR015WQ12169 119 aa4.77□□□□□ -1.65
RAT1YOR048C POF1P25576 258 aa4.77□□□□□ -1.65
RAT1YOR048C BUB3P26449 341 aa4.77□□□□□ -1.65
RAT1YOR048C VMA5P31412 392 aaKnown RBP4.77□□□□□ -1.65
RAT1YOR048C NAB2P32505 525 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
RAT1YOR048C SIP1P32578 815 aa4.77□□□□□ -1.65
RAT1YOR048C PAD1P33751 242 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65 RIP-Chip
RAT1YOR048C YBR013CP38215 129 aa4.77□□□□□ -1.65
RAT1YOR048C TRR2P38816 342 aa4.77□□□□□ -1.65
RAT1YOR048C GET2P40056 285 aa4.77□□□□□ -1.65
RAT1YOR048C BUD8P41698 603 aa4.77□□□□□ -1.65
RAT1YOR048C YJR056CP47115 236 aa4.77□□□□□ -1.65
RAT1YOR048C BUL1P48524 976 aa4.77□□□□□ -1.65
RAT1YOR048C TUB4P53378 473 aa4.77□□□□□ -1.65
RAT1YOR048C ARL3Q02804 198 aa4.77□□□□□ -1.65
RAT1YOR048C YDL086WQ07505 273 aa4.77□□□□□ -1.65
RAT1YOR048C SRL2Q12020 392 aa4.77□□□□□ -1.65
RAT1YOR048C FCF2Q12035 217 aaPredicted RBP4.77□□□□□ -1.65
RAT1YOR048C FSH3Q99369 266 aa4.77□□□□□ -1.65
RAT1YOR048C CDC34P14682 295 aa4.76□□□□□ -1.65
RAT1YOR048C ZRC1P20107 442 aa4.76□□□□□ -1.65
RAT1YOR048C PPZ2P33329 710 aa4.76□□□□□ -1.65
RAT1YOR048C FLO5P38894 1075 aa4.76□□□□□ -1.65
RAT1YOR048C LRO1P40345 661 aa4.76□□□□□ -1.65
RAT1YOR048C PHB2P50085 310 aa4.76□□□□□ -1.65
RAT1YOR048C NTF2P33331 125 aaKnown RBP4.76□□□□□ -1.65
RAT1YOR048C VPS51P36116 164 aa4.76□□□□□ -1.65
RAT1YOR048C YHR180WP38868 163 aa4.76□□□□□ -1.65
RAT1YOR048C PAC1P39946 494 aaKnown RBP4.76□□□□□ -1.65
RAT1YOR048C YIL077CP40508 320 aa4.76□□□□□ -1.65
RAT1YOR048C YIL024CP40543 189 aa4.76□□□□□ -1.65
RAT1YOR048C HOL1P53389 586 aa4.76□□□□□ -1.65
RAT1YOR048C EGD1Q02642 157 aaKnown RBP4.76□□□□□ -1.65
RAT1YOR048C YDR248CQ03786 193 aa4.76□□□□□ -1.65
RAT1YOR048C NOC4Q06512 552 aaPredicted RBP4.76□□□□□ -1.65
RAT1YOR048C INH1P01097 85 aa4.75□□□□□ -1.65
RAT1YOR048C SEC12P11655 471 aa4.75□□□□□ -1.65
RAT1YOR048C OLE1P21147 510 aaKnown RBP4.75□□□□□ -1.65
RAT1YOR048C HSP150P32478 413 aa4.75□□□□□ -1.65
RAT1YOR048C TRS65P32893 560 aa4.75□□□□□ -1.65
RAT1YOR048C RPS27AP35997 82 aaKnown RBP4.75□□□□□ -1.65
RAT1YOR048C YKL162CP36052 402 aa4.75□□□□□ -1.65
RAT1YOR048C RPL14AP36105 138 aaKnown RBP4.75□□□□□ -1.65
RAT1YOR048C RPS27BP38711 82 aa4.75□□□□□ -1.65
RAT1YOR048C RPL14BP38754 138 aaKnown RBP4.75□□□□□ -1.65
RAT1YOR048C QRI1P43123 477 aaKnown RBP4.75□□□□□ -1.65
RAT1YOR048C LOH1P47055 219 aa4.75□□□□□ -1.65
RAT1YOR048C AVT4P50944 713 aa4.75□□□□□ -1.65
RAT1YOR048C PNC1P53184 216 aaKnown RBP4.75□□□□□ -1.65
RAT1YOR048C CGR1P53188 120 aa4.75□□□□□ -1.65
RAT1YOR048C RNH70P53331 553 aa4.75□□□□□ -1.65
RAT1YOR048C CWC24P53769 259 aa4.75□□□□□ -1.65
RAT1YOR048C FYV6P53913 173 aa4.75□□□□□ -1.65
RAT1YOR048C YDR387CQ04162 555 aa4.75□□□□□ -1.65
RAT1YOR048C RPS31P05759 152 aaKnown RBP4.75□□□□□ -1.65
RAT1YOR048C GAL7P08431 366 aa4.75□□□□□ -1.65
RAT1YOR048C UBI4P0CG63 381 aaKnown RBP4.75□□□□□ -1.65
RAT1YOR048C RPL40AP0CH08 128 aaKnown RBP4.75□□□□□ -1.65
RAT1YOR048C RPL40BP0CH09 128 aaKnown RBP4.75□□□□□ -1.65
RAT1YOR048C IFM1P25038 676 aa4.75□□□□□ -1.65
RAT1YOR048C CPR3P25719 182 aa4.75□□□□□ -1.65
RAT1YOR048C MSK1P32048 576 aa4.75□□□□□ -1.65
RAT1YOR048C UMP1P38293 148 aa4.75□□□□□ -1.65
RAT1YOR048C YER158CP40095 573 aa4.75□□□□□ -1.65
RAT1YOR048C MRX5P47007 382 aa4.75□□□□□ -1.65
RAT1YOR048C TAF4P50105 388 aa4.75□□□□□ -1.65
RAT1YOR048C YDR415CQ04033 374 aaPredicted RBP4.75□□□□□ -1.65
RAT1YOR048C CTS2Q06350 511 aa4.75□□□□□ -1.65
RAT1YOR048C YPR174CQ06616 221 aaPredicted RBP4.75□□□□□ -1.65
RAT1YOR048C PIB1Q06651 286 aa4.75□□□□□ -1.65
RAT1YOR048C YFT2Q06676 274 aa4.75□□□□□ -1.65
RAT1YOR048C AHC1Q12433 566 aa4.75□□□□□ -1.65
RAT1YOR048C FMT1P32785 401 aa4.75□□□□□ -1.65
RAT1YOR048C OAR1P35731 278 aa4.75□□□□□ -1.65
RAT1YOR048C NIT2P47016 307 aa4.75□□□□□ -1.65
RAT1YOR048C MOG1P47123 218 aa4.75□□□□□ -1.65
RAT1YOR048C YGL235WP53071 178 aa4.75□□□□□ -1.65
RAT1YOR048C YGR012WP53206 393 aa4.75□□□□□ -1.65
RAT1YOR048C NRK1P53915 240 aa4.75□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms