RNA–Protein interactions for RNA: YLR170C

APS1, Transcript of Small subunit of the clathrin-associated adaptor complex AP-1, yeast

Gene APS1, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS1	YLR170C	MAK3	Q03503	176 aa		4.1	□□□□□ -1.75
APS1	YLR170C	RCE1	Q03530	315 aa		4.1	□□□□□ -1.75
APS1	YLR170C	TSR2	Q06672	205 aa	Known RBP	4.1	□□□□□ -1.75
APS1	YLR170C	RKM1	Q08961	583 aa	Predicted RBP	4.1	□□□□□ -1.75
APS1	YLR170C	RTC5	Q12108	567 aa	Known RBP	4.1	□□□□□ -1.75
APS1	YLR170C	YEL009C-A	A0A023PZF2	135 aa		4.09	□□□□□ -1.75
APS1	YLR170C	SIR2	P06700	562 aa		4.09	□□□□□ -1.75
APS1	YLR170C	HXT2	P23585	541 aa		4.09	□□□□□ -1.75
APS1	YLR170C	SED4	P25365	1065 aa		4.09	□□□□□ -1.75
APS1	YLR170C	ARO7	P32178	256 aa		4.09	□□□□□ -1.75
APS1	YLR170C	PAU2	P32612	120 aa		4.09	□□□□□ -1.75
APS1	YLR170C	CLG1	P35190	452 aa		4.09	□□□□□ -1.75
APS1	YLR170C	FRM2	P37261	193 aa		4.09	□□□□□ -1.75
APS1	YLR170C	YBR137W	P38276	179 aa		4.09	□□□□□ -1.75
APS1	YLR170C	YMR144W	P40214	342 aa	Known RBP	4.09	□□□□□ -1.75
APS1	YLR170C	SLS1	P42900	643 aa		4.09	□□□□□ -1.75
APS1	YLR170C	LOH1	P47055	219 aa		4.09	□□□□□ -1.75
APS1	YLR170C	SIP18	P50263	79 aa		4.09	□□□□□ -1.75
APS1	YLR170C	YGR054W	P53235	642 aa	Known RBP	4.09	□□□□□ -1.75
APS1	YLR170C	MSS11	Q03825	758 aa		4.09	□□□□□ -1.75
APS1	YLR170C	NNT1	Q05874	261 aa		4.09	□□□□□ -1.75
APS1	YLR170C	MDM36	Q06820	579 aa		4.09	□□□□□ -1.75
APS1	YLR170C	MSH5	Q12175	901 aa		4.09	□□□□□ -1.75
APS1	YLR170C	YPR1	Q12458	312 aa		4.09	□□□□□ -1.75
APS1	YLR170C	REP1	P03871	373 aa		4.08	□□□□□ -1.76
APS1	YLR170C	KIN28	P06242	306 aa		4.08	□□□□□ -1.76
APS1	YLR170C	CDC31	P06704	161 aa	Known RBP	4.08	□□□□□ -1.76
APS1	YLR170C	NAM2	P11325	894 aa		4.08	□□□□□ -1.76
APS1	YLR170C	STE18	P18852	110 aa		4.08	□□□□□ -1.76
APS1	YLR170C	CPR2	P23285	205 aa		4.08	□□□□□ -1.76
APS1	YLR170C	DPB2	P24482	689 aa	Predicted RBP	4.08	□□□□□ -1.76
APS1	YLR170C	BOS1	P25385	244 aa		4.08	□□□□□ -1.76
APS1	YLR170C	UTP11	P34247	250 aa	Predicted RBP	4.08	□□□□□ -1.76
APS1	YLR170C	SFK1	P35735	353 aa		4.08	□□□□□ -1.76
APS1	YLR170C	RSM22	P36056	628 aa		4.08	□□□□□ -1.76
APS1	YLR170C	ANR2	P36090	516 aa	Predicted RBP	4.08	□□□□□ -1.76
APS1	YLR170C	APL3	P38065	1025 aa		4.08	□□□□□ -1.76
APS1	YLR170C	JLP2	P40206	208 aa		4.08	□□□□□ -1.76
APS1	YLR170C	MOB2	P43563	287 aa		4.08	□□□□□ -1.76
APS1	YLR170C	LYS20	P48570	428 aa	Known RBP	4.08	□□□□□ -1.76
APS1	YLR170C	YGR045C	P53229	120 aa		4.08	□□□□□ -1.76
APS1	YLR170C	MTM1	P53320	366 aa		4.08	□□□□□ -1.76
APS1	YLR170C	CPR8	P53728	308 aa		4.08	□□□□□ -1.76
APS1	YLR170C	SAM50	P53969	484 aa		4.08	□□□□□ -1.76
APS1	YLR170C	YLR152C	P54072	576 aa		4.08	□□□□□ -1.76
APS1	YLR170C	ACS1	Q01574	713 aa		4.08	□□□□□ -1.76
APS1	YLR170C	YMR252C	Q04814	134 aa		4.08	□□□□□ -1.76
APS1	YLR170C	FIT3	Q08907	204 aa		4.08	□□□□□ -1.76
APS1	YLR170C	LYS21	Q12122	440 aa	Known RBP	4.08	□□□□□ -1.76
APS1	YLR170C	MCT1	Q12283	360 aa		4.08	□□□□□ -1.76
APS1	YLR170C	ISA2	Q12425	185 aa		4.08	□□□□□ -1.76
APS1	YLR170C	COX5B	P00425	151 aa		4.07	□□□□□ -1.76
APS1	YLR170C	MES1	P00958	751 aa	Known RBP	4.07	□□□□□ -1.76
APS1	YLR170C	HIS3	P06633	220 aa		4.07	□□□□□ -1.76
APS1	YLR170C	ERG24	P32462	438 aa	Known RBP	4.07	□□□□□ -1.76
APS1	YLR170C	RPC34	P32910	317 aa		4.07	□□□□□ -1.76
APS1	YLR170C	MTR2	P34232	184 aa	Known RBP	4.07	□□□□□ -1.76
APS1	YLR170C	ZRT3	P34240	503 aa		4.07	□□□□□ -1.76
APS1	YLR170C	SPT10	P35208	640 aa		4.07	□□□□□ -1.76
APS1	YLR170C	MBA1	P38300	278 aa		4.07	□□□□□ -1.76
APS1	YLR170C	TOK1	P40310	691 aa		4.07	□□□□□ -1.76
APS1	YLR170C	FMC1	P40491	155 aa		4.07	□□□□□ -1.76
APS1	YLR170C	BUD8	P41698	603 aa		4.07	□□□□□ -1.76
APS1	YLR170C	CTK2	P46962	323 aa		4.07	□□□□□ -1.76
APS1	YLR170C	YIP4	P53093	235 aa		4.07	□□□□□ -1.76
APS1	YLR170C	RSM23	Q01163	450 aa		4.07	□□□□□ -1.76
APS1	YLR170C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
APS1	YLR170C	MRP51	Q02950	344 aa		4.07	□□□□□ -1.76
APS1	YLR170C	YPR196W	Q06595	470 aa		4.07	□□□□□ -1.76
APS1	YLR170C	MCM21	Q06675	368 aa		4.07	□□□□□ -1.76
APS1	YLR170C	RTN2	Q12443	393 aa		4.07	□□□□□ -1.76
APS1	YLR170C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
APS1	YLR170C	TRA1	P38811	3744 aa		4.07	□□□□□ -1.76
APS1	YLR170C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
APS1	YLR170C	CHO1	P08456	276 aa		4.06	□□□□□ -1.76
APS1	YLR170C	MET3	P08536	511 aa		4.06	□□□□□ -1.76
APS1	YLR170C	PCL1	P24867	279 aa		4.06	□□□□□ -1.76
APS1	YLR170C	REC114	P32841	428 aa		4.06	□□□□□ -1.76
APS1	YLR170C	MTH1	P35198	433 aa		4.06	□□□□□ -1.76
APS1	YLR170C	SMB1	P40018	196 aa	Known RBP	4.06	□□□□□ -1.76
APS1	YLR170C	FCY21	P40039	528 aa		4.06	□□□□□ -1.76
APS1	YLR170C	AIM20	P40451	204 aa		4.06	□□□□□ -1.76
APS1	YLR170C	OST1	P41543	476 aa	Known RBP	4.06	□□□□□ -1.76
APS1	YLR170C	ERJ5	P43613	295 aa	Predicted RBP	4.06	□□□□□ -1.76
APS1	YLR170C	YJR120W	P47157	116 aa		4.06	□□□□□ -1.76
APS1	YLR170C	PHB2	P50085	310 aa		4.06	□□□□□ -1.76
APS1	YLR170C	AAH1	P53909	347 aa		4.06	□□□□□ -1.76
APS1	YLR170C	ASI3	P53983	676 aa		4.06	□□□□□ -1.76
APS1	YLR170C	CIK1	Q01649	594 aa		4.06	□□□□□ -1.76
APS1	YLR170C	DIG2	Q03373	323 aa	Known RBP	4.06	□□□□□ -1.76
APS1	YLR170C	TDA1	Q03533	586 aa		4.06	□□□□□ -1.76
APS1	YLR170C	GAT3	Q07928	141 aa		4.06	□□□□□ -1.76
APS1	YLR170C	ATG41	Q12048	136 aa		4.06	□□□□□ -1.76
APS1	YLR170C	ORT1	Q12375	292 aa		4.06	□□□□□ -1.76
APS1	YLR170C	DSF1	P0CX08	502 aa		4.05	□□□□□ -1.76
APS1	YLR170C	YNR073C	P0CX09	502 aa		4.05	□□□□□ -1.76
APS1	YLR170C	RPL30	P14120	105 aa	Known RBP	4.05	□□□□□ -1.76
APS1	YLR170C	RPL24B	P24000	155 aa	Known RBP	4.05	□□□□□ -1.76
APS1	YLR170C	KRR1	P25586	316 aa	Predicted RBP	4.05	□□□□□ -1.76
APS1	YLR170C	CLB6	P32943	380 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms