RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W KEI1Q06346 221 aa8.72□□□□□ -1.01
SHH4YLR164W ENV7Q12003 364 aa8.72□□□□□ -1.01
SHH4YLR164W RRI1Q12468 440 aa8.72□□□□□ -1.01
SHH4YLR164W GCN1P33892 2672 aaKnown RBP8.71□□□□□ -1.01
SHH4YLR164W IPP1P00817 287 aaKnown RBP8.71□□□□□ -1.02
SHH4YLR164W PHO2P07269 559 aa8.71□□□□□ -1.02
SHH4YLR164W ACH1P32316 526 aa8.71□□□□□ -1.02
SHH4YLR164W DBF20P32328 564 aa8.71□□□□□ -1.02
SHH4YLR164W RCN1P36054 211 aa8.71□□□□□ -1.02
SHH4YLR164W YHR122WP38829 231 aa8.71□□□□□ -1.02
SHH4YLR164W CAT5P41735 233 aa8.71□□□□□ -1.02
SHH4YLR164W ERJ5P43613 295 aaPredicted RBP8.71□□□□□ -1.02
SHH4YLR164W BNA6P43619 295 aa8.71□□□□□ -1.02
SHH4YLR164W POP6P53218 158 aa8.71□□□□□ -1.02
SHH4YLR164W MTM1P53320 366 aa8.71□□□□□ -1.02
SHH4YLR164W MRPL19P53875 158 aa8.71□□□□□ -1.02
SHH4YLR164W RVB1Q03940 463 aaKnown RBP8.71□□□□□ -1.02
SHH4YLR164W PEX30Q06169 523 aa8.71□□□□□ -1.02
SHH4YLR164W RAF1Q06891 181 aa8.71□□□□□ -1.02
SHH4YLR164W THI72Q08579 599 aa8.71□□□□□ -1.02
SHH4YLR164W YPL199CQ08954 240 aa8.71□□□□□ -1.02
SHH4YLR164W ISA2Q12425 185 aa8.71□□□□□ -1.02
SHH4YLR164W MCM1P11746 286 aa8.7□□□□□ -1.02
SHH4YLR164W PET18P25362 215 aa8.7□□□□□ -1.02
SHH4YLR164W STS1P38637 319 aa8.7□□□□□ -1.02
SHH4YLR164W GPP1P41277 250 aaKnown RBP8.7□□□□□ -1.02
SHH4YLR164W LSM7P53905 115 aaKnown RBP8.7□□□□□ -1.02
SHH4YLR164W YDR387CQ04162 555 aa8.7□□□□□ -1.02
SHH4YLR164W API2Q04413 109 aa8.7□□□□□ -1.02
SHH4YLR164W CDC36P06100 191 aaPredicted RBP8.69□□□□□ -1.02
SHH4YLR164W HEM4P06174 275 aa8.69□□□□□ -1.02
SHH4YLR164W PET54P10834 293 aa8.69□□□□□ -1.02
SHH4YLR164W MAK32P23060 363 aa8.69□□□□□ -1.02
SHH4YLR164W ARO4P32449 370 aaKnown RBP8.69□□□□□ -1.02
SHH4YLR164W PTI1P39927 425 aaPredicted RBP8.69□□□□□ -1.02
SHH4YLR164W YER084WP40057 128 aa8.69□□□□□ -1.02
SHH4YLR164W RTT105P40063 208 aa8.69□□□□□ -1.02
SHH4YLR164W GPI14P47088 403 aaKnown RBP8.69□□□□□ -1.02
SHH4YLR164W YGR042WP53227 271 aa8.69□□□□□ -1.02
SHH4YLR164W RNH201P53942 307 aa8.69□□□□□ -1.02
SHH4YLR164W IZH2Q12442 317 aa8.69□□□□□ -1.02
SHH4YLR164W TRA1P38811 3744 aa8.68□□□□□ -1.02
SHH4YLR164W RNP1P32385 249 aa8.68□□□□□ -1.02
SHH4YLR164W HYM1P32464 399 aa8.68□□□□□ -1.02
SHH4YLR164W AGA2P32781 87 aa8.68□□□□□ -1.02
SHH4YLR164W SNC2P33328 115 aa8.68□□□□□ -1.02
SHH4YLR164W XBP1P40489 647 aa8.68□□□□□ -1.02
SHH4YLR164W IDP2P41939 412 aa8.68□□□□□ -1.02
SHH4YLR164W YGL159WP53110 370 aa8.68□□□□□ -1.02
SHH4YLR164W HHT1P61830 136 aa8.68□□□□□ -1.02
SHH4YLR164W RCE1Q03530 315 aa8.68□□□□□ -1.02
SHH4YLR164W FRE3Q08905 711 aa8.68□□□□□ -1.02
SHH4YLR164W NCE102Q12207 173 aaRIP-Chip data8.68□□□□□ -1.02not detected
SHH4YLR164W YLR358CO13565 187 aa8.67□□□□□ -1.02
SHH4YLR164W GPM1P00950 247 aaKnown RBP8.67□□□□□ -1.02
SHH4YLR164W RPL3P14126 387 aaKnown RBP8.67□□□□□ -1.02
SHH4YLR164W YCP4P25349 247 aaKnown RBP8.67□□□□□ -1.02
SHH4YLR164W TCM62P38228 572 aaKnown RBP8.67□□□□□ -1.02
SHH4YLR164W BOL3P39724 118 aa8.67□□□□□ -1.02
SHH4YLR164W YFL051CP43552 160 aa8.67□□□□□ -1.02
SHH4YLR164W OTU1P43558 301 aa8.67□□□□□ -1.02
SHH4YLR164W UBX6P47049 396 aa8.67□□□□□ -1.02
SHH4YLR164W ACS2P52910 683 aaKnown RBP8.67□□□□□ -1.02
SHH4YLR164W SCW4P53334 386 aaKnown RBP8.67□□□□□ -1.02
SHH4YLR164W RSM23Q01163 450 aa8.67□□□□□ -1.02
SHH4YLR164W ODC2Q99297 307 aa8.67□□□□□ -1.02
SHH4YLR164W ATG22P25568 528 aa8.66□□□□□ -1.02
SHH4YLR164W MOB2P43563 287 aa8.66□□□□□ -1.02
SHH4YLR164W YJL016WP47072 561 aa8.66□□□□□ -1.02
SHH4YLR164W BXI1P48558 297 aa8.66□□□□□ -1.02
SHH4YLR164W MTL1P53214 551 aa8.66□□□□□ -1.02
SHH4YLR164W NRK1P53915 240 aa8.66□□□□□ -1.02
SHH4YLR164W YMR130WQ04223 302 aa8.66□□□□□ -1.02
SHH4YLR164W YLR283WQ05867 314 aa8.66□□□□□ -1.02
SHH4YLR164W RPI1P23250 407 aaKnown RBP8.65□□□□□ -1.02
SHH4YLR164W HXT2P23585 541 aa8.65□□□□□ -1.02
SHH4YLR164W BUD23P25627 275 aaPredicted RBP8.65□□□□□ -1.02
SHH4YLR164W AFG1P32317 509 aa8.65□□□□□ -1.02
SHH4YLR164W KRE6P32486 720 aa8.65□□□□□ -1.02
SHH4YLR164W MRT4P33201 236 aaKnown RBP8.65□□□□□ -1.02
SHH4YLR164W PPZ2P33329 710 aa8.65□□□□□ -1.02
SHH4YLR164W CLG1P35190 452 aa8.65□□□□□ -1.02
SHH4YLR164W APL3P38065 1025 aa8.65□□□□□ -1.02
SHH4YLR164W UMP1P38293 148 aa8.65□□□□□ -1.02
SHH4YLR164W GPI16P38875 610 aa8.65□□□□□ -1.02
SHH4YLR164W SEN34P39707 275 aa8.65□□□□□ -1.02
SHH4YLR164W SMB1P40018 196 aaKnown RBP8.65□□□□□ -1.02
SHH4YLR164W QDR1P40475 563 aa8.65□□□□□ -1.02
SHH4YLR164W SYS1P41544 203 aa8.65□□□□□ -1.02
SHH4YLR164W DIE2P50076 525 aa8.65□□□□□ -1.02
SHH4YLR164W SLI1P53304 468 aa8.65□□□□□ -1.02
SHH4YLR164W MRPL13Q02204 264 aa8.65□□□□□ -1.02
SHH4YLR164W RPL6AQ02326 176 aaKnown RBP8.65□□□□□ -1.02
SHH4YLR164W CTF19Q02732 369 aa8.65□□□□□ -1.02
SHH4YLR164W DIG2Q03373 323 aaKnown RBP8.65□□□□□ -1.02
SHH4YLR164W CRR1Q05790 422 aa8.65□□□□□ -1.02
SHH4YLR164W FIT3Q08907 204 aa8.65□□□□□ -1.02
SHH4YLR164W HTZ1Q12692 134 aaKnown RBP8.65□□□□□ -1.02
SHH4YLR164W DSF1P0CX08 502 aa8.64□□□□□ -1.03
SHH4YLR164W YNR073CP0CX09 502 aa8.64□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms