RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeastyeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKG1YKR100C RUP1Q12242 671 aa3.87□□□□□ -1.79
SKG1YKR100C RRP42Q12277 265 aaPredicted RBP3.87□□□□□ -1.79
SKG1YKR100C RNH203Q12338 110 aa3.87□□□□□ -1.79
SKG1YKR100C PSF1Q12488 208 aa3.87□□□□□ -1.79
SKG1YKR100C HEK2P38199 381 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SKG1YKR100C CLD1P53264 445 aa3.86□□□□□ -1.79
SKG1YKR100C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SKG1YKR100C RPL6AQ02326 176 aaKnown RBP3.86□□□□□ -1.79
SKG1YKR100C IPK1Q06667 281 aa3.86□□□□□ -1.79
SKG1YKR100C LOT6Q07923 191 aa3.86□□□□□ -1.79
SKG1YKR100C PIS1P06197 220 aaKnown RBP3.85□□□□□ -1.79
SKG1YKR100C RHO1P06780 209 aaKnown RBP3.85□□□□□ -1.79
SKG1YKR100C RPS23AP0CX29 145 aaKnown RBP3.85□□□□□ -1.79
SKG1YKR100C RPS23BP0CX30 145 aa3.85□□□□□ -1.79
SKG1YKR100C ARO3P14843 370 aaKnown RBP3.85□□□□□ -1.79
SKG1YKR100C BYE1P36106 594 aa3.85□□□□□ -1.79
SKG1YKR100C YPL039WQ03080 316 aa3.85□□□□□ -1.79
SKG1YKR100C MED2Q12124 431 aa3.85□□□□□ -1.79
SKG1YKR100C ERV1P27882 189 aa3.84□□□□□ -1.79
SKG1YKR100C GPI18P38211 433 aa3.84□□□□□ -1.79
SKG1YKR100C SLM4P38247 162 aa3.84□□□□□ -1.79
SKG1YKR100C YNL208WP40159 199 aaKnown RBP3.84□□□□□ -1.79
SKG1YKR100C AIP1P46680 615 aaKnown RBP3.84□□□□□ -1.79
SKG1YKR100C TPC1P53257 314 aa3.84□□□□□ -1.79
SKG1YKR100C RCE1Q03530 315 aa3.84□□□□□ -1.79
SKG1YKR100C RRP36Q12481 300 aaPredicted RBP3.84□□□□□ -1.79
SKG1YKR100C PET9P18239 318 aaKnown RBP3.83□□□□□ -1.8
SKG1YKR100C MDH3P32419 343 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
SKG1YKR100C RPC25P35718 212 aa3.83□□□□□ -1.8
SKG1YKR100C YER079WP40052 210 aaKnown RBP3.83□□□□□ -1.8
SKG1YKR100C PRM10P42946 383 aa3.83□□□□□ -1.8
SKG1YKR100C YNL260CP53846 198 aa3.83□□□□□ -1.8
SKG1YKR100C HOT1Q03213 719 aa3.83□□□□□ -1.8
SKG1YKR100C CTS2Q06350 511 aa3.83□□□□□ -1.8
SKG1YKR100C TAZ1Q06510 381 aa3.83□□□□□ -1.8
SKG1YKR100C GAT3Q07928 141 aa3.83□□□□□ -1.8
SKG1YKR100C YCR024C-BQ3E7Z8 88 aa3.83□□□□□ -1.8
SKG1YKR100C ZRC1P20107 442 aa3.82□□□□□ -1.8
SKG1YKR100C DOA1P36037 715 aa3.82□□□□□ -1.8
SKG1YKR100C NPT1P39683 429 aaKnown RBP3.82□□□□□ -1.8
SKG1YKR100C YER084WP40057 128 aa3.82□□□□□ -1.8
SKG1YKR100C VHS2P40463 436 aa3.82□□□□□ -1.8
SKG1YKR100C RPA43P46669 326 aa3.82□□□□□ -1.8
SKG1YKR100C YGL262WP53054 175 aa3.82□□□□□ -1.8
SKG1YKR100C DST1P07273 309 aa3.81□□□□□ -1.8
SKG1YKR100C GCD2P12754 651 aaPredicted RBP3.81□□□□□ -1.8
SKG1YKR100C SLM5P25345 492 aaKnown RBP3.81□□□□□ -1.8
SKG1YKR100C GPX1P36014 167 aa3.81□□□□□ -1.8
SKG1YKR100C CUE1P38428 203 aa3.81□□□□□ -1.8
SKG1YKR100C STP2P38704 541 aa3.81□□□□□ -1.8
SKG1YKR100C UBC13P52490 153 aa3.81□□□□□ -1.8
SKG1YKR100C YMR279CQ03263 540 aa3.81□□□□□ -1.8
SKG1YKR100C UNG1P12887 359 aa3.8□□□□□ -1.8
SKG1YKR100C TRX3P25372 127 aa3.8□□□□□ -1.8
SKG1YKR100C IGD1P43598 195 aa3.8□□□□□ -1.8
SKG1YKR100C FIP1P45976 327 aa3.8□□□□□ -1.8
SKG1YKR100C SRB7P47822 140 aa3.8□□□□□ -1.8
SKG1YKR100C YIP5P53108 310 aa3.8□□□□□ -1.8
SKG1YKR100C TPS1Q00764 495 aaKnown RBP3.8□□□□□ -1.8
SKG1YKR100C YPR078CQ06813 372 aa3.8□□□□□ -1.8
SKG1YKR100C TIM9O74700 87 aa3.79□□□□□ -1.8
SKG1YKR100C RNR2P09938 399 aaKnown RBP3.79□□□□□ -1.8
SKG1YKR100C MRPL27P36526 146 aaPredicted RBP3.79□□□□□ -1.8
SKG1YKR100C SPR6Q01684 191 aa3.79□□□□□ -1.8
SKG1YKR100C MSC3Q05812 728 aa3.79□□□□□ -1.8
SKG1YKR100C EFM1P38732 585 aa3.78□□□□□ -1.8
SKG1YKR100C YNR064CP53750 290 aa3.78□□□□□ -1.8
SKG1YKR100C GRE1Q08969 168 aa3.78□□□□□ -1.8
SKG1YKR100C RPL22AP05749 121 aaKnown RBP3.77□□□□□ -1.81
SKG1YKR100C EHD3P28817 500 aa3.77□□□□□ -1.81
SKG1YKR100C COX13P32799 129 aa3.77□□□□□ -1.81
SKG1YKR100C OLA1P38219 394 aaKnown RBP3.77□□□□□ -1.81
SKG1YKR100C YIL001WP40560 513 aa3.77□□□□□ -1.81
SKG1YKR100C SPP2Q02521 185 aa3.77□□□□□ -1.81
SKG1YKR100C NCE101Q02820 53 aa3.77□□□□□ -1.81
SKG1YKR100C SNX41Q04053 625 aa3.77□□□□□ -1.81
SKG1YKR100C SLD7Q08457 257 aa3.77□□□□□ -1.81
SKG1YKR100C RDL2Q08742 149 aaKnown RBP3.77□□□□□ -1.81
SKG1YKR100C MHF1Q3E835 90 aa3.77□□□□□ -1.81
SKG1YKR100C STE7P06784 515 aa3.76□□□□□ -1.81
SKG1YKR100C RPL5P26321 297 aaKnown RBP3.76□□□□□ -1.81
SKG1YKR100C PRX1P34227 261 aaKnown RBP3.76□□□□□ -1.81
SKG1YKR100C JNM1P36224 373 aa3.76□□□□□ -1.81
SKG1YKR100C RFT1P38206 574 aaPredicted RBP3.76□□□□□ -1.81
SKG1YKR100C ZTA1P38230 334 aaKnown RBP3.76□□□□□ -1.81
SKG1YKR100C MCH1Q07376 486 aa3.76□□□□□ -1.81
SKG1YKR100C YDL114WQ07530 308 aa3.76□□□□□ -1.81
SKG1YKR100C YDL109CQ12103 647 aa3.76□□□□□ -1.81
SKG1YKR100C HTZ1Q12692 134 aaKnown RBP3.76□□□□□ -1.81
SKG1YKR100C PBN1P25580 416 aa3.75□□□□□ -1.81
SKG1YKR100C DEP1P31385 405 aa3.75□□□□□ -1.81
SKG1YKR100C SMI1P32566 505 aa3.75□□□□□ -1.81
SKG1YKR100C CTR2P38865 189 aa3.75□□□□□ -1.81
SKG1YKR100C SEC9P40357 651 aa3.75□□□□□ -1.81
SKG1YKR100C ACT1P60010 375 aaKnown RBP3.75□□□□□ -1.81
SKG1YKR100C AEP3Q12089 606 aa3.75□□□□□ -1.81
SKG1YKR100C USB1Q12208 290 aaKnown RBP3.75□□□□□ -1.81
SKG1YKR100C GCY1P14065 312 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
SKG1YKR100C CMK2P22517 447 aa3.74□□□□□ -1.81
SKG1YKR100C FUN26P31381 517 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms