RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W STB1P42845 420 aa4.68□□□□□ -1.66
CBF1YJR060W COS10P52924 374 aa4.68□□□□□ -1.66
CBF1YJR060W NQM1P53228 333 aaPredicted RBP4.68□□□□□ -1.66
CBF1YJR060W RVB1Q03940 463 aaKnown RBP4.68□□□□□ -1.66
CBF1YJR060W RBS1Q05672 457 aaKnown RBP4.68□□□□□ -1.66
CBF1YJR060W YPR147CQ06522 304 aaKnown RBP4.68□□□□□ -1.66
CBF1YJR060W SPC3Q12133 184 aa4.68□□□□□ -1.66
CBF1YJR060W YRM1Q12340 786 aa4.68□□□□□ -1.66
CBF1YJR060W YOR343CQ12484 108 aa4.68□□□□□ -1.66
CBF1YJR060W YDL007C-AQ2V2Q0 85 aa4.68□□□□□ -1.66
CBF1YJR060W YAL064W-BO13512 126 aa4.67□□□□□ -1.66
CBF1YJR060W CHO1P08456 276 aa4.67□□□□□ -1.66
CBF1YJR060W AQY1P0CD91 305 aa4.67□□□□□ -1.66
CBF1YJR060W PHO80P20052 293 aa4.67□□□□□ -1.66
CBF1YJR060W IDP1P21954 428 aaKnown RBP4.67□□□□□ -1.66
CBF1YJR060W MDH2P22133 377 aa4.67□□□□□ -1.66
CBF1YJR060W PRP21P32524 280 aaPredicted RBP4.67□□□□□ -1.66
CBF1YJR060W RPL32P38061 130 aaKnown RBP4.67□□□□□ -1.66
CBF1YJR060W CHL4P38907 458 aa4.67□□□□□ -1.66
CBF1YJR060W KRE29P40026 464 aa4.67□□□□□ -1.66
CBF1YJR060W YNL208WP40159 199 aaKnown RBP4.67□□□□□ -1.66
CBF1YJR060W YIL169CP40442 995 aa4.67□□□□□ -1.66
CBF1YJR060W YMD8Q03697 442 aa4.67□□□□□ -1.66
CBF1YJR060W ARP10Q04549 284 aa4.67□□□□□ -1.66
CBF1YJR060W YDR286CQ05530 114 aa4.67□□□□□ -1.66
CBF1YJR060W BTS1Q12051 335 aa4.67□□□□□ -1.66
CBF1YJR060W YPL119C-AQ3E751 87 aa4.67□□□□□ -1.66
CBF1YJR060W RPB8P20436 146 aa4.66□□□□□ -1.66
CBF1YJR060W OAC1P32332 324 aa4.66□□□□□ -1.66
CBF1YJR060W MDH3P32419 343 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
CBF1YJR060W PAD1P33751 242 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
CBF1YJR060W EGD2P38879 174 aaKnown RBP4.66□□□□□ -1.66
CBF1YJR060W RFC4P40339 323 aaKnown RBP4.66□□□□□ -1.66
CBF1YJR060W GVP36P40531 326 aaKnown RBP4.66□□□□□ -1.66
CBF1YJR060W IRC7P43623 340 aa4.66□□□□□ -1.66
CBF1YJR060W TAX4P47030 604 aa4.66□□□□□ -1.66
CBF1YJR060W NUP116Q02630 1113 aa4.66□□□□□ -1.66
CBF1YJR060W HOT1Q03213 719 aa4.66□□□□□ -1.66
CBF1YJR060W SCS7Q03529 384 aa4.66□□□□□ -1.66
CBF1YJR060W SIA1Q12212 622 aa4.66□□□□□ -1.66
CBF1YJR060W YDL180WQ12301 547 aa4.66□□□□□ -1.66
CBF1YJR060W MET2P08465 486 aa4.65□□□□□ -1.67
CBF1YJR060W SSA3P09435 649 aaKnown RBP4.65□□□□□ -1.67
CBF1YJR060W YGL041W-AP0C5N3 154 aa4.65□□□□□ -1.67
CBF1YJR060W CTA1P15202 515 aa4.65□□□□□ -1.67
CBF1YJR060W KRR1P25586 316 aaPredicted RBP4.65□□□□□ -1.67
CBF1YJR060W CAM1P29547 415 aaKnown RBP4.65□□□□□ -1.67
CBF1YJR060W KRE6P32486 720 aa4.65□□□□□ -1.67
CBF1YJR060W YME2P32843 850 aa4.65□□□□□ -1.67
CBF1YJR060W YBR096WP38256 230 aa4.65□□□□□ -1.67
CBF1YJR060W MED8P38304 223 aa4.65□□□□□ -1.67
CBF1YJR060W YBR285WP38354 144 aa4.65□□□□□ -1.67
CBF1YJR060W SOP4P39543 234 aaPredicted RBP4.65□□□□□ -1.67
CBF1YJR060W PDS1P40316 373 aaPredicted RBP4.65□□□□□ -1.67
CBF1YJR060W MNT4P53745 580 aa4.65□□□□□ -1.67
CBF1YJR060W RSM23Q01163 450 aa4.65□□□□□ -1.67
CBF1YJR060W SPO19Q03029 223 aa4.65□□□□□ -1.67
CBF1YJR060W SNZ1Q03148 297 aa4.65□□□□□ -1.67
CBF1YJR060W RNH1Q04740 348 aa4.65□□□□□ -1.67
CBF1YJR060W MRPL51Q06090 140 aaPredicted RBP4.65□□□□□ -1.67
CBF1YJR060W RTC5Q12108 567 aaKnown RBP4.65□□□□□ -1.67
CBF1YJR060W RDL1Q12305 139 aaKnown RBP4.65□□□□□ -1.67
CBF1YJR060W PST2Q12335 198 aaKnown RBP4.65□□□□□ -1.67
CBF1YJR060W PCL9Q12477 304 aa4.65□□□□□ -1.67
CBF1YJR060W MED11Q99278 115 aa4.65□□□□□ -1.67
CBF1YJR060W YER145C-AA0A023PYF4 145 aa4.64□□□□□ -1.67
CBF1YJR060W MSW1P04803 379 aa4.64□□□□□ -1.67
CBF1YJR060W PRB1P09232 635 aa4.64□□□□□ -1.67
CBF1YJR060W RPL31BP0C2H9 113 aaKnown RBP4.64□□□□□ -1.67
CBF1YJR060W MAK32P23060 363 aa4.64□□□□□ -1.67
CBF1YJR060W URE2P23202 354 aaKnown RBP4.64□□□□□ -1.67
CBF1YJR060W RTC2P38279 296 aa4.64□□□□□ -1.67
CBF1YJR060W NTC20P38302 140 aaPredicted RBP4.64□□□□□ -1.67
CBF1YJR060W IMD2P38697 523 aaKnown RBP4.64□□□□□ -1.67
CBF1YJR060W YHR035WP38769 630 aa4.64□□□□□ -1.67
CBF1YJR060W NAS2P40555 220 aa4.64□□□□□ -1.67
CBF1YJR060W MSS2P40990 351 aa4.64□□□□□ -1.67
CBF1YJR060W IMD3P50095 523 aaKnown RBP4.64□□□□□ -1.67
CBF1YJR060W BRR6P53062 197 aa4.64□□□□□ -1.67
CBF1YJR060W YMR099CQ03161 297 aaKnown RBP4.64□□□□□ -1.67
CBF1YJR060W TLG1Q03322 224 aa4.64□□□□□ -1.67
CBF1YJR060W OST6Q03723 332 aa4.64□□□□□ -1.67
CBF1YJR060W YMR087WQ04299 284 aa4.64□□□□□ -1.67
CBF1YJR060W YDL114WQ07530 308 aa4.64□□□□□ -1.67
CBF1YJR060W MCH4Q08268 501 aa4.64□□□□□ -1.67
CBF1YJR060W HRT1Q08273 121 aa4.64□□□□□ -1.67
CBF1YJR060W FRE3Q08905 711 aa4.64□□□□□ -1.67
CBF1YJR060W YOR289WQ12012 251 aaPredicted RBP4.64□□□□□ -1.67
CBF1YJR060W TRM10Q12400 293 aa4.64□□□□□ -1.67
CBF1YJR060W HEM4P06174 275 aa4.63□□□□□ -1.67
CBF1YJR060W CNA1P23287 553 aa4.63□□□□□ -1.67
CBF1YJR060W EXG1P23776 448 aaKnown RBP4.63□□□□□ -1.67
CBF1YJR060W SUR1P33300 382 aa4.63□□□□□ -1.67
CBF1YJR060W COS9P36034 407 aa4.63□□□□□ -1.67
CBF1YJR060W SEN34P39707 275 aa4.63□□□□□ -1.67
CBF1YJR060W MKC7P53379 596 aa4.63□□□□□ -1.67
CBF1YJR060W PGA1P53896 198 aa4.63□□□□□ -1.67
CBF1YJR060W PET191Q02772 108 aa4.63□□□□□ -1.67
CBF1YJR060W BNA7Q04066 261 aa4.63□□□□□ -1.67
CBF1YJR060W RRP9Q06506 573 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms