RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C JLP1Q12358 412 aa3.32□□□□□ -1.88
SPB4YFL002C CAM1P29547 415 aaKnown RBP3.31□□□□□ -1.88
SPB4YFL002C GDH2P33327 1092 aaKnown RBP3.31□□□□□ -1.88
SPB4YFL002C MRPL3P36516 390 aa3.31□□□□□ -1.88
SPB4YFL002C HEK2P38199 381 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
SPB4YFL002C EGD2P38879 174 aaKnown RBP3.31□□□□□ -1.88
SPB4YFL002C ADO1P47143 340 aaKnown RBP3.31□□□□□ -1.88
SPB4YFL002C DIA1P54005 336 aa3.31□□□□□ -1.88
SPB4YFL002C RHO3Q00245 231 aaKnown RBP3.31□□□□□ -1.88
SPB4YFL002C YPL113CQ02961 396 aa3.31□□□□□ -1.88
SPB4YFL002C MRX11Q03079 207 aa3.31□□□□□ -1.88
SPB4YFL002C FAR8Q05040 523 aa3.31□□□□□ -1.88
SPB4YFL002C CMC2Q3E7A4 109 aa3.31□□□□□ -1.88
SPB4YFL002C QCR7P00128 127 aa3.3□□□□□ -1.88
SPB4YFL002C RPL28P02406 149 aaKnown RBP3.3□□□□□ -1.88
SPB4YFL002C SPT3P06844 337 aa3.3□□□□□ -1.88
SPB4YFL002C BCY1P07278 416 aaKnown RBP3.3□□□□□ -1.88
SPB4YFL002C YCR025CP25352 136 aa3.3□□□□□ -1.88
SPB4YFL002C VPH2P32341 215 aa3.3□□□□□ -1.88
SPB4YFL002C SPS19P32573 292 aaKnown RBP3.3□□□□□ -1.88
SPB4YFL002C SGE1P33335 543 aa3.3□□□□□ -1.88
SPB4YFL002C YHR127WP38833 243 aaKnown RBP3.3□□□□□ -1.88
SPB4YFL002C FRT2P39734 528 aa3.3□□□□□ -1.88
SPB4YFL002C ALG13P53178 202 aa3.3□□□□□ -1.88
SPB4YFL002C FMP48P53233 369 aa3.3□□□□□ -1.88
SPB4YFL002C SNZ2P53824 298 aa3.3□□□□□ -1.88
SPB4YFL002C UTP15Q04305 513 aaKnown RBP3.3□□□□□ -1.88
SPB4YFL002C GIM5Q04493 163 aa3.3□□□□□ -1.88
SPB4YFL002C PEX10Q05568 337 aa3.3□□□□□ -1.88
SPB4YFL002C CDD1Q06549 142 aa3.3□□□□□ -1.88
SPB4YFL002C YLR126CQ12288 251 aa3.3□□□□□ -1.88
SPB4YFL002C YMR230W-AQ3E7B5 62 aa3.3□□□□□ -1.88
SPB4YFL002C IMP1P28627 190 aa3.3□□□□□ -1.88
SPB4YFL002C TIP20P33891 701 aa3.3□□□□□ -1.88
SPB4YFL002C YHL049CP38722 271 aa3.3□□□□□ -1.88
SPB4YFL002C UTP18P40362 594 aaPredicted RBP3.3□□□□□ -1.88
SPB4YFL002C YIL001WP40560 513 aa3.3□□□□□ -1.88
SPB4YFL002C SNZ3P43545 298 aa3.3□□□□□ -1.88
SPB4YFL002C IGD1P43598 195 aa3.3□□□□□ -1.88
SPB4YFL002C NUP57P48837 541 aa3.3□□□□□ -1.88
SPB4YFL002C TRM9P49957 279 aa3.3□□□□□ -1.88
SPB4YFL002C NSA1P53136 463 aaPredicted RBP3.3□□□□□ -1.88
SPB4YFL002C RPL21AQ02753 160 aaKnown RBP3.3□□□□□ -1.88
SPB4YFL002C SPG4Q04438 115 aa3.3□□□□□ -1.88
SPB4YFL002C YDR018CQ12185 396 aa3.3□□□□□ -1.88
SPB4YFL002C YKR104WP0CE69 306 aa3.29□□□□□ -1.88
SPB4YFL002C DPB2P24482 689 aaPredicted RBP3.29□□□□□ -1.88
SPB4YFL002C GGC1P38988 300 aa3.29□□□□□ -1.88
SPB4YFL002C SEC72P39742 193 aaKnown RBP3.29□□□□□ -1.88
SPB4YFL002C GAB1P41733 394 aa3.29□□□□□ -1.88
SPB4YFL002C YGL260WP53056 76 aa3.29□□□□□ -1.88
SPB4YFL002C YGL039WP53183 348 aaKnown RBP3.29□□□□□ -1.88
SPB4YFL002C FMP41P53889 259 aaKnown RBP3.29□□□□□ -1.88
SPB4YFL002C LIP2Q06005 328 aa3.29□□□□□ -1.88
SPB4YFL002C DXO1Q06349 442 aa3.29□□□□□ -1.88
SPB4YFL002C HEM25Q07534 307 aa3.29□□□□□ -1.88
SPB4YFL002C MCM22P47167 239 aa3.28□□□□□ -1.88
SPB4YFL002C YJR149WP47177 404 aa3.28□□□□□ -1.88
SPB4YFL002C PRP24P49960 444 aaKnown RBP3.28□□□□□ -1.88
SPB4YFL002C EFM5P53200 248 aaKnown RBP3.28□□□□□ -1.88
SPB4YFL002C FYV6P53913 173 aa3.28□□□□□ -1.88
SPB4YFL002C MRS2Q01926 470 aa3.28□□□□□ -1.88
SPB4YFL002C SEI1Q06058 285 aa3.28□□□□□ -1.88
SPB4YFL002C TRM10Q12400 293 aa3.28□□□□□ -1.88
SPB4YFL002C SNA3P14359 133 aa3.28□□□□□ -1.88
SPB4YFL002C POP8P38208 133 aa3.28□□□□□ -1.88
SPB4YFL002C RRG9P40156 214 aa3.28□□□□□ -1.88
SPB4YFL002C ERG10P41338 398 aaKnown RBP3.28□□□□□ -1.88
SPB4YFL002C IRC18P47056 224 aa3.28□□□□□ -1.88
SPB4YFL002C CPR7P47103 393 aa3.28□□□□□ -1.88
SPB4YFL002C SLX9P53251 210 aaPredicted RBP3.28□□□□□ -1.88
SPB4YFL002C INP1Q03694 420 aa3.28□□□□□ -1.88
SPB4YFL002C VHS1Q03785 461 aa3.28□□□□□ -1.88
SPB4YFL002C API2Q04413 109 aa3.28□□□□□ -1.88
SPB4YFL002C FUS2Q05670 677 aa3.28□□□□□ -1.88
SPB4YFL002C YPR147CQ06522 304 aaKnown RBP3.28□□□□□ -1.88
SPB4YFL002C RRG7Q08774 242 aaPredicted RBP3.28□□□□□ -1.88
SPB4YFL002C GPM2Q12008 311 aa3.28□□□□□ -1.88
SPB4YFL002C IKI3Q06706 1349 aaKnown RBP3.27□□□□□ -1.89
SPB4YFL002C CAT2P32796 670 aaKnown RBP3.27□□□□□ -1.89
SPB4YFL002C DRE2P36152 348 aa3.27□□□□□ -1.89
SPB4YFL002C MRPL39P36533 70 aa3.27□□□□□ -1.89
SPB4YFL002C TRM5P38793 499 aa3.27□□□□□ -1.89
SPB4YFL002C YHB1P39676 399 aaKnown RBP3.27□□□□□ -1.89
SPB4YFL002C BMT5P40493 336 aa3.27□□□□□ -1.89
SPB4YFL002C YLR152CP54072 576 aa3.27□□□□□ -1.89
SPB4YFL002C TPO4Q12256 659 aa3.27□□□□□ -1.89
SPB4YFL002C TUS1Q06412 1307 aa3.27□□□□□ -1.89
SPB4YFL002C SIR4P11978 1358 aa3.27□□□□□ -1.89
SPB4YFL002C PPH21P23594 369 aa3.26□□□□□ -1.89
SPB4YFL002C HMT1P38074 348 aa3.26□□□□□ -1.89
SPB4YFL002C YIL012WP40551 113 aa3.26□□□□□ -1.89
SPB4YFL002C BRR6P53062 197 aa3.26□□□□□ -1.89
SPB4YFL002C AAH1P53909 347 aa3.26□□□□□ -1.89
SPB4YFL002C YMR244WQ04018 355 aa3.26□□□□□ -1.89
SPB4YFL002C YAL063C-AQ3E791 96 aa3.26□□□□□ -1.89
SPB4YFL002C MIC19P43594 170 aa3.26□□□□□ -1.89
SPB4YFL002C OST3P48439 350 aa3.26□□□□□ -1.89
SPB4YFL002C MRH4P53166 561 aa3.26□□□□□ -1.89
SPB4YFL002C YDL144CQ07589 356 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms