RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W RPC40P07703 335 aaKnown RBP1.94□□□□□ -2.1
SSF2YDR312W FUS3P16892 353 aaKnown RBP1.94□□□□□ -2.1
SSF2YDR312W RPL16BP26785 198 aaKnown RBP1.94□□□□□ -2.1
SSF2YDR312W INO2P26798 304 aa1.94□□□□□ -2.1
SSF2YDR312W SWD2P36104 329 aaPredicted RBP1.94□□□□□ -2.1
SSF2YDR312W FRM2P37261 193 aa1.94□□□□□ -2.1
SSF2YDR312W RFT1P38206 574 aaPredicted RBP1.94□□□□□ -2.1
SSF2YDR312W HIS2P38635 335 aa1.94□□□□□ -2.1
SSF2YDR312W FRT2P39734 528 aa1.94□□□□□ -2.1
SSF2YDR312W SLM1P40485 686 aa1.94□□□□□ -2.1
SSF2YDR312W GPI8P49018 411 aa1.94□□□□□ -2.1
SSF2YDR312W UBC13P52490 153 aa1.94□□□□□ -2.1
SSF2YDR312W TPC1P53257 314 aa1.94□□□□□ -2.1
SSF2YDR312W YPL080CQ02826 108 aa1.94□□□□□ -2.1
SSF2YDR312W INP2Q03824 705 aa1.94□□□□□ -2.1
SSF2YDR312W UTP15Q04305 513 aaKnown RBP1.94□□□□□ -2.1
SSF2YDR312W ECM18Q04623 453 aa1.94□□□□□ -2.1
SSF2YDR312W MRX8Q05473 314 aa1.94□□□□□ -2.1
SSF2YDR312W CLP1Q08685 445 aaPredicted RBP1.94□□□□□ -2.1
SSF2YDR312W BI3Q9ZZW7 517 aa1.94□□□□□ -2.1
SSF2YDR312W TDH3P00359 332 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
SSF2YDR312W SSA3P09435 649 aaKnown RBP1.93□□□□□ -2.1
SSF2YDR312W RPL31AP0C2H8 113 aaKnown RBP1.93□□□□□ -2.1
SSF2YDR312W COX10P21592 462 aa1.93□□□□□ -2.1
SSF2YDR312W SGE1P33335 543 aa1.93□□□□□ -2.1
SSF2YDR312W YKL063CP35725 167 aa1.93□□□□□ -2.1
SSF2YDR312W KDX1P36005 433 aa1.93□□□□□ -2.1
SSF2YDR312W AIM29P36154 155 aa1.93□□□□□ -2.1
SSF2YDR312W TRR2P38816 342 aa1.93□□□□□ -2.1
SSF2YDR312W YIR035CP40579 254 aa1.93□□□□□ -2.1
SSF2YDR312W AGP3P43548 558 aa1.93□□□□□ -2.1
SSF2YDR312W ASG7P46993 209 aa1.93□□□□□ -2.1
SSF2YDR312W MRX5P47007 382 aa1.93□□□□□ -2.1
SSF2YDR312W YNR066CP53752 436 aa1.93□□□□□ -2.1
SSF2YDR312W YPL113CQ02961 396 aa1.93□□□□□ -2.1
SSF2YDR312W YMR244WQ04018 355 aa1.93□□□□□ -2.1
SSF2YDR312W FUS2Q05670 677 aa1.93□□□□□ -2.1
SSF2YDR312W PBP4Q07362 185 aaKnown RBP1.93□□□□□ -2.1
SSF2YDR312W PER33Q12144 273 aa1.93□□□□□ -2.1
SSF2YDR312W YPR064WQ12492 139 aa1.93□□□□□ -2.1
SSF2YDR312W LAG2Q92325 660 aa1.93□□□□□ -2.1
SSF2YDR312W RPL24AP04449 155 aaKnown RBP1.92□□□□□ -2.1
SSF2YDR312W GAL7P08431 366 aa1.92□□□□□ -2.1
SSF2YDR312W SPS100P13130 326 aa1.92□□□□□ -2.1
SSF2YDR312W FRS2P15625 503 aaKnown RBP1.92□□□□□ -2.1
SSF2YDR312W OM45P16547 393 aa1.92□□□□□ -2.1
SSF2YDR312W MRPL20P22354 195 aaPredicted RBP1.92□□□□□ -2.1
SSF2YDR312W AGA2P32781 87 aa1.92□□□□□ -2.1
SSF2YDR312W MRPL6P32904 214 aa1.92□□□□□ -2.1
SSF2YDR312W RPC37P36121 282 aa1.92□□□□□ -2.1
SSF2YDR312W SIP3P38717 1229 aa1.92□□□□□ -2.1
SSF2YDR312W RTT105P40063 208 aa1.92□□□□□ -2.1
SSF2YDR312W RRG9P40156 214 aa1.92□□□□□ -2.1
SSF2YDR312W YFL064CP43540 174 aa1.92□□□□□ -2.1
SSF2YDR312W YPT32P51996 222 aaKnown RBP1.92□□□□□ -2.1
SSF2YDR312W PNC1P53184 216 aaKnown RBP1.92□□□□□ -2.1
SSF2YDR312W INP1Q03694 420 aa1.92□□□□□ -2.1
SSF2YDR312W YPR195CQ06594 109 aa1.92□□□□□ -2.1
SSF2YDR312W YDL211CQ12121 372 aa1.92□□□□□ -2.1
SSF2YDR312W YPS3Q12303 508 aa1.92□□□□□ -2.1
SSF2YDR312W TFC7Q12415 435 aa1.92□□□□□ -2.1
SSF2YDR312W VPS1P21576 704 aaKnown RBP1.91□□□□□ -2.1
SSF2YDR312W MEK1P24719 497 aaPredicted RBP1.91□□□□□ -2.1
SSF2YDR312W ATG15P25641 520 aa1.91□□□□□ -2.1
SSF2YDR312W AEP1P32493 518 aa1.91□□□□□ -2.1
SSF2YDR312W BMH2P34730 273 aaKnown RBP1.91□□□□□ -2.1
SSF2YDR312W YKL070WP36087 169 aa1.91□□□□□ -2.1
SSF2YDR312W ASP1P38986 381 aaPredicted RBP1.91□□□□□ -2.1
SSF2YDR312W BDH1P39714 382 aa1.91□□□□□ -2.1
SSF2YDR312W LSM4P40070 187 aaKnown RBP1.91□□□□□ -2.1
SSF2YDR312W DSE1P40077 573 aa1.91□□□□□ -2.1
SSF2YDR312W RSM25P40496 264 aa1.91□□□□□ -2.1
SSF2YDR312W GCD14P46959 383 aaPredicted RBP1.91□□□□□ -2.1
SSF2YDR312W EMC2P47133 292 aaKnown RBP1.91□□□□□ -2.1
SSF2YDR312W HSH155P49955 971 aaKnown RBP1.91□□□□□ -2.1
SSF2YDR312W RPN14P53196 417 aa1.91□□□□□ -2.1
SSF2YDR312W FMP48P53233 369 aa1.91□□□□□ -2.1
SSF2YDR312W ZRG17P53735 605 aa1.91□□□□□ -2.1
SSF2YDR312W IGO1P53897 168 aa1.91□□□□□ -2.1
SSF2YDR312W ECM19Q06011 112 aa1.91□□□□□ -2.1
SSF2YDR312W MIM1Q08176 113 aa1.91□□□□□ -2.1
SSF2YDR312W RFM1Q12192 310 aa1.91□□□□□ -2.1
SSF2YDR312W DFM1Q12743 341 aaKnown RBP1.91□□□□□ -2.1
SSF2YDR312W TFS1P14306 219 aa1.9□□□□□ -2.11
SSF2YDR312W PPH21P23594 369 aa1.9□□□□□ -2.11
SSF2YDR312W GPI12P23797 304 aa1.9□□□□□ -2.11
SSF2YDR312W CSM1P25651 190 aa1.9□□□□□ -2.11
SSF2YDR312W RPB9P27999 122 aa1.9□□□□□ -2.11
SSF2YDR312W SUA5P32579 426 aa1.9□□□□□ -2.11
SSF2YDR312W IMP3P32899 183 aaPredicted RBP1.9□□□□□ -2.11
SSF2YDR312W ZRT3P34240 503 aa1.9□□□□□ -2.11
SSF2YDR312W TPO5P36029 618 aa1.9□□□□□ -2.11
SSF2YDR312W ECM13P38195 257 aa1.9□□□□□ -2.11
SSF2YDR312W YHI9P38765 294 aa1.9□□□□□ -2.11
SSF2YDR312W YIA6P40556 373 aa1.9□□□□□ -2.11
SSF2YDR312W CPR7P47103 393 aa1.9□□□□□ -2.11
SSF2YDR312W KAP114P53067 1004 aa1.9□□□□□ -2.11
SSF2YDR312W MND1P53102 219 aa1.9□□□□□ -2.11
SSF2YDR312W COG7P53195 279 aa1.9□□□□□ -2.11
SSF2YDR312W SEC13Q04491 297 aaKnown RBP1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 140.8 ms