RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C DBR1P24309 405 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C CHA1P25379 360 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C MXR2P25566 168 aa0.7□□□□□ -2.3
SEC1YDR164C ADE1P27616 306 aa0.7□□□□□ -2.3
SEC1YDR164C ACH1P32316 526 aa0.7□□□□□ -2.3
SEC1YDR164C MKK1P32490 508 aa0.7□□□□□ -2.3
SEC1YDR164C ECM25P32525 599 aa0.7□□□□□ -2.3
SEC1YDR164C SPS19P32573 292 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C REC114P32841 428 aa0.7□□□□□ -2.3
SEC1YDR164C SFC1P33303 322 aa0.7□□□□□ -2.3
SEC1YDR164C ECM15P35195 104 aa0.7□□□□□ -2.3
SEC1YDR164C SRY1P36007 326 aa0.7□□□□□ -2.3
SEC1YDR164C YPT52P36018 234 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C MID2P36027 376 aa0.7□□□□□ -2.3
SEC1YDR164C FRE2P36033 711 aa0.7□□□□□ -2.3
SEC1YDR164C YCR041WP37265 110 aa0.7□□□□□ -2.3
SEC1YDR164C GPX2P38143 162 aa0.7□□□□□ -2.3
SEC1YDR164C FIG1P38224 298 aa0.7□□□□□ -2.3
SEC1YDR164C ECM8P38246 354 aa0.7□□□□□ -2.3
SEC1YDR164C ARN2P38724 620 aa0.7□□□□□ -2.3
SEC1YDR164C YHR122WP38829 231 aa0.7□□□□□ -2.3
SEC1YDR164C YHR127WP38833 243 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C RPS14BP39516 138 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C AIM10P39965 576 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C ISC1P40015 477 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C RTT105P40063 208 aa0.7□□□□□ -2.3
SEC1YDR164C TIF34P40217 347 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C RFC4P40339 323 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C YKE4P40544 346 aa0.7□□□□□ -2.3
SEC1YDR164C GAB1P41733 394 aa0.7□□□□□ -2.3
SEC1YDR164C YGR210CP42942 411 aa0.7□□□□□ -2.3
SEC1YDR164C CIS3P47001 227 aa0.7□□□□□ -2.3
SEC1YDR164C GLG2P47011 380 aa0.7□□□□□ -2.3
SEC1YDR164C YHC3P47040 408 aa0.7□□□□□ -2.3
SEC1YDR164C LOH1P47055 219 aa0.7□□□□□ -2.3
SEC1YDR164C JHD2P47156 728 aaPredicted RBP0.7□□□□□ -2.3
SEC1YDR164C YJR149WP47177 404 aa0.7□□□□□ -2.3
SEC1YDR164C SSN8P47821 323 aa0.7□□□□□ -2.3
SEC1YDR164C YIP1P53039 248 aa0.7□□□□□ -2.3
SEC1YDR164C TPN1P53099 579 aa0.7□□□□□ -2.3
SEC1YDR164C YGR015CP53208 328 aa0.7□□□□□ -2.3
SEC1YDR164C PCP1P53259 346 aa0.7□□□□□ -2.3
SEC1YDR164C YGR168CP53293 376 aa0.7□□□□□ -2.3
SEC1YDR164C RRN9P53437 365 aa0.7□□□□□ -2.3
SEC1YDR164C RCF2P53721 224 aa0.7□□□□□ -2.3
SEC1YDR164C ZRG17P53735 605 aa0.7□□□□□ -2.3
SEC1YDR164C PRM1P53835 661 aa0.7□□□□□ -2.3
SEC1YDR164C SLM2P53955 656 aa0.7□□□□□ -2.3
SEC1YDR164C NUP116Q02630 1113 aa0.7□□□□□ -2.3
SEC1YDR164C STD1Q02794 444 aa0.7□□□□□ -2.3
SEC1YDR164C YDR124WQ04608 324 aa0.7□□□□□ -2.3
SEC1YDR164C NAT4Q04751 285 aa0.7□□□□□ -2.3
SEC1YDR164C MSC3Q05812 728 aa0.7□□□□□ -2.3
SEC1YDR164C ARV1Q06541 321 aa0.7□□□□□ -2.3
SEC1YDR164C GPN3Q06543 272 aa0.7□□□□□ -2.3
SEC1YDR164C YPR091CQ06833 770 aa0.7□□□□□ -2.3
SEC1YDR164C REX4Q08237 289 aa0.7□□□□□ -2.3
SEC1YDR164C RRP40Q08285 240 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C RRG7Q08774 242 aaPredicted RBP0.7□□□□□ -2.3
SEC1YDR164C SNX3Q08826 162 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C FEX1Q08913 375 aa0.7□□□□□ -2.3
SEC1YDR164C MMT2Q08970 484 aa0.7□□□□□ -2.3
SEC1YDR164C PER33Q12144 273 aa0.7□□□□□ -2.3
SEC1YDR164C SIA1Q12212 622 aa0.7□□□□□ -2.3
SEC1YDR164C YGK3Q12222 375 aaPredicted RBP0.7□□□□□ -2.3
SEC1YDR164C ATG34Q12292 412 aa0.7□□□□□ -2.3
SEC1YDR164C JLP1Q12358 412 aa0.7□□□□□ -2.3
SEC1YDR164C ORT1Q12375 292 aa0.7□□□□□ -2.3
SEC1YDR164C RRP12Q12754 1228 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C LAG2Q92325 660 aa0.7□□□□□ -2.3
SEC1YDR164C YRF1-3P0CX14 1859 aa0.7□□□□□ -2.3
SEC1YDR164C YRF1-7P0CX15 1859 aa0.7□□□□□ -2.3
SEC1YDR164C YRF1-6P53819 1859 aa0.7□□□□□ -2.3
SEC1YDR164C FAB1P34756 2278 aa0.7□□□□□ -2.3
SEC1YDR164C VPS63O13549 108 aa0.7□□□□□ -2.3
SEC1YDR164C REP2P03872 296 aa0.7□□□□□ -2.3
SEC1YDR164C CBP2P03874 630 aaPredicted RBP0.7□□□□□ -2.3
SEC1YDR164C YLL053CP0CD98 152 aa0.7□□□□□ -2.3
SEC1YDR164C RPL20AP0CX23 172 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C RPL20BP0CX24 172 aaPredicted RBP0.7□□□□□ -2.3
SEC1YDR164C RPL12AP0CX53 165 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C RPL12BP0CX54 165 aa0.7□□□□□ -2.3
SEC1YDR164C CAP2P13517 287 aa0.7□□□□□ -2.3
SEC1YDR164C KSS1P14681 368 aa0.7□□□□□ -2.3
SEC1YDR164C SNF6P18888 332 aa0.7□□□□□ -2.3
SEC1YDR164C PHO80P20052 293 aa0.7□□□□□ -2.3
SEC1YDR164C SEC62P21825 274 aa0.7□□□□□ -2.3
SEC1YDR164C IDP1P21954 428 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C MAG1P22134 296 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C AAT2P23542 418 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C ATG22P25568 528 aa0.7□□□□□ -2.3
SEC1YDR164C YCR016WP25617 290 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C YCR022CP25620 114 aa0.7□□□□□ -2.3
SEC1YDR164C CSM1P25651 190 aa0.7□□□□□ -2.3
SEC1YDR164C DAL80P26343 269 aa0.7□□□□□ -2.3
SEC1YDR164C ITR1P30605 584 aa0.7□□□□□ -2.3
SEC1YDR164C HOM6P31116 359 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C TOA2P32774 122 aa0.7□□□□□ -2.3
SEC1YDR164C MGM101P32787 269 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C VPS17P32913 551 aa0.7□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms