RNA–Protein interactions for RNA: YDL146W

LDB17, Transcript of Protein involved in the regulation of endocytosis, yeast

Gene LDB17, Length 1,476 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDB17	YDL146W	LSO2	Q3E772	92 aa	Known RBP	4.06	□□□□□ -1.76
LDB17	YDL146W	RPS18A	P0CX55	146 aa	Known RBP	4.05	□□□□□ -1.76
LDB17	YDL146W	RPS18B	P0CX56	146 aa	Predicted RBP	4.05	□□□□□ -1.76
LDB17	YDL146W	CBS2	P14905	389 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	FUN26	P31381	517 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	ECM13	P38195	257 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	YND1	P40009	630 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	MOB2	P43563	287 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	VPS60	Q03390	229 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	NOC4	Q06512	552 aa	Predicted RBP	4.05	□□□□□ -1.76
LDB17	YDL146W	RIO1	Q12196	484 aa	Known RBP	4.05	□□□□□ -1.76
LDB17	YDL146W	BI3	Q9ZZW7	517 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	RPS28B	P0C0X0	67 aa	Known RBP	4.05	□□□□□ -1.76
LDB17	YDL146W	MRPL20	P22354	195 aa	Predicted RBP	4.05	□□□□□ -1.76
LDB17	YDL146W	MIR1	P23641	311 aa	Known RBP	4.05	□□□□□ -1.76
LDB17	YDL146W	NAT2	P37293	288 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	MED8	P38304	223 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	RCK1	P38622	512 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	HEM14	P40012	539 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	YML096W	Q04489	525 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	GRX8	Q05926	109 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	GAS2	Q06135	555 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	YPR147C	Q06522	304 aa	Known RBP	4.05	□□□□□ -1.76
LDB17	YDL146W	NSL1	Q12143	216 aa		4.05	□□□□□ -1.76
LDB17	YDL146W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.05	□□□□□ -1.76
LDB17	YDL146W	MHP1	P43638	1398 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	RPS14A	P06367	137 aa	Known RBP	4.04	□□□□□ -1.76
LDB17	YDL146W	YOL163W	P0CF20	169 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	RPL4A	P10664	362 aa	Known RBP	4.04	□□□□□ -1.76
LDB17	YDL146W	DPM1	P14020	267 aa	Known RBP	4.04	□□□□□ -1.76
LDB17	YDL146W	SEN2	P16658	377 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	MRPL28	P36527	147 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	MDM31	P38880	579 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	RPS14B	P39516	138 aa	Known RBP	4.04	□□□□□ -1.76
LDB17	YDL146W	RPL4B	P49626	362 aa	Known RBP	4.04	□□□□□ -1.76
LDB17	YDL146W	JAC1	P53193	184 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	YGR042W	P53227	271 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	NQM1	P53228	333 aa	Predicted RBP	4.04	□□□□□ -1.76
LDB17	YDL146W	MSO1	P53604	210 aa	Known RBP	4.04	□□□□□ -1.76
LDB17	YDL146W	NRM1	P53718	249 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	TPS1	Q00764	495 aa	Known RBP	4.04	□□□□□ -1.76
LDB17	YDL146W	NUP49	Q02199	472 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	YMR279C	Q03263	540 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	SPG4	Q04438	115 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	INM2	Q05533	292 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	FAR10	Q06001	478 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	SEI1	Q06058	285 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	RIF2	Q06208	395 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	USB1	Q12208	290 aa	Known RBP	4.04	□□□□□ -1.76
LDB17	YDL146W	EMP46	Q12396	444 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	MRX4	Q12467	430 aa		4.04	□□□□□ -1.76
LDB17	YDL146W	YKR104W	P0CE69	306 aa		4.03	□□□□□ -1.76
LDB17	YDL146W	ISY1	P21374	235 aa	Predicted RBP	4.03	□□□□□ -1.76
LDB17	YDL146W	DBF2	P22204	572 aa		4.03	□□□□□ -1.76
LDB17	YDL146W	URA10	P30402	227 aa		4.03	□□□□□ -1.76
LDB17	YDL146W	PMU1	P36069	295 aa		4.03	□□□□□ -1.76
LDB17	YDL146W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
LDB17	YDL146W	YBR062C	P38239	180 aa		4.03	□□□□□ -1.76
LDB17	YDL146W	YAP3	P38749	330 aa		4.03	□□□□□ -1.76
LDB17	YDL146W	YMR144W	P40214	342 aa	Known RBP	4.03	□□□□□ -1.76
LDB17	YDL146W	HAC1	P41546	238 aa		4.03	□□□□□ -1.76
LDB17	YDL146W	DIM1	P41819	318 aa	Known RBP	4.03	□□□□□ -1.76
LDB17	YDL146W	YFH7	P43591	353 aa		4.03	□□□□□ -1.76
LDB17	YDL146W	ABF2	Q02486	183 aa		4.03	□□□□□ -1.76
LDB17	YDL146W	UTP15	Q04305	513 aa	Known RBP	4.03	□□□□□ -1.76
LDB17	YDL146W	YPL245W	Q12179	454 aa	Known RBP	4.03	□□□□□ -1.76
LDB17	YDL146W	HMS1	Q12398	434 aa		4.03	□□□□□ -1.76
LDB17	YDL146W	AGC1	Q12482	902 aa		4.03	□□□□□ -1.76
LDB17	YDL146W	COX5A	P00424	153 aa		4.02	□□□□□ -1.77
LDB17	YDL146W	MET2	P08465	486 aa		4.02	□□□□□ -1.77
LDB17	YDL146W	ATR1	P13090	542 aa		4.02	□□□□□ -1.77
LDB17	YDL146W	MTC4	P38335	694 aa	Known RBP	4.02	□□□□□ -1.77
LDB17	YDL146W	CHL4	P38907	458 aa		4.02	□□□□□ -1.77
LDB17	YDL146W	PAN6	P40459	309 aa		4.02	□□□□□ -1.77
LDB17	YDL146W	RSM25	P40496	264 aa		4.02	□□□□□ -1.77
LDB17	YDL146W	MRPL49	P40858	161 aa	Predicted RBP	4.02	□□□□□ -1.77
LDB17	YDL146W	COG7	P53195	279 aa		4.02	□□□□□ -1.77
LDB17	YDL146W	TPC1	P53257	314 aa		4.02	□□□□□ -1.77
LDB17	YDL146W	DXO1	Q06349	442 aa		4.02	□□□□□ -1.77
LDB17	YDL146W	LOA1	Q06508	300 aa		4.02	□□□□□ -1.77
LDB17	YDL146W	THP3	Q12049	470 aa	Known RBP	4.02	□□□□□ -1.77
LDB17	YDL146W	YLR050C	Q12155	161 aa	Known RBP	4.02	□□□□□ -1.77
LDB17	YDL146W	ERV2	Q12284	196 aa		4.02	□□□□□ -1.77
LDB17	YDL146W	NOT5	Q12514	560 aa	Predicted RBP	4.02	□□□□□ -1.77
LDB17	YDL146W	GCN3	P14741	305 aa		4.01	□□□□□ -1.77
LDB17	YDL146W	TAH1	P25638	111 aa	Predicted RBP	4.01	□□□□□ -1.77
LDB17	YDL146W	MGT1	P26188	188 aa		4.01	□□□□□ -1.77
LDB17	YDL146W	SRY1	P36007	326 aa		4.01	□□□□□ -1.77
LDB17	YDL146W	ECM33	P38248	429 aa	Known RBP	4.01	□□□□□ -1.77
LDB17	YDL146W	EDC3	P39998	551 aa	Known RBP	4.01	□□□□□ -1.77
LDB17	YDL146W	PRM10	P42946	383 aa		4.01	□□□□□ -1.77
LDB17	YDL146W	BXI1	P48558	297 aa		4.01	□□□□□ -1.77
LDB17	YDL146W	TOS8	P53147	276 aa		4.01	□□□□□ -1.77
LDB17	YDL146W	SYF2	P53277	215 aa	Predicted RBP	4.01	□□□□□ -1.77
LDB17	YDL146W	YNR066C	P53752	436 aa		4.01	□□□□□ -1.77
LDB17	YDL146W	YMR315W	Q04869	349 aa	Known RBP	4.01	□□□□□ -1.77
LDB17	YDL146W	YLR053C	Q12026	108 aa		4.01	□□□□□ -1.77
LDB17	YDL146W	YMR316C-A	I2HB70	103 aa		4	□□□□□ -1.77
LDB17	YDL146W	CDC28	P00546	298 aa	Known RBP	4	□□□□□ -1.77
LDB17	YDL146W	CYC3	P06182	269 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms