RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	EHD3	P28817	500 aa		3.42	□□□□□ -1.86
RPO21	YDL140C	HXT1	P32465	570 aa		3.42	□□□□□ -1.86
RPO21	YDL140C	RPL34B	P40525	121 aa	Known RBP	3.42	□□□□□ -1.86
RPO21	YDL140C	SNM1	P40993	198 aa		3.42	□□□□□ -1.86
RPO21	YDL140C	NMA111	P53920	997 aa		3.42	□□□□□ -1.86
RPO21	YDL140C	RPL34A	P87262	121 aa	Predicted RBP	3.42	□□□□□ -1.86
RPO21	YDL140C	KRE6	P32486	720 aa		3.42	□□□□□ -1.86
RPO21	YDL140C	YBR013C	P38215	129 aa		3.42	□□□□□ -1.86
RPO21	YDL140C	SVP26	P38869	228 aa		3.42	□□□□□ -1.86
RPO21	YDL140C	SMB1	P40018	196 aa	Known RBP	3.42	□□□□□ -1.86
RPO21	YDL140C	YMD8	Q03697	442 aa		3.42	□□□□□ -1.86
RPO21	YDL140C	SSK1	Q07084	712 aa		3.42	□□□□□ -1.86
RPO21	YDL140C	RPL9A	P05738	191 aa	Known RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	RPL15A	P05748	204 aa	Known RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	SCO1	P23833	295 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	HSP30	P25619	332 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	YBR241C	P38142	488 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	TCM62	P38228	572 aa	Known RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	YPC1	P38298	316 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	PHM8	P40025	321 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	LSM1	P47017	172 aa	Known RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	RPL15B	P54780	204 aa	Predicted RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	ELP6	Q04868	273 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	MRX9	Q07349	420 aa	Known RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	PER33	Q12144	273 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	ISN1	Q99312	450 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	CDC28	P00546	298 aa	Known RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	RPI1	P23250	407 aa	Known RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	EXG1	P23776	448 aa	Known RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	AGA2	P32781	87 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	ECM34	P38728	170 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	PFS2	P42841	465 aa	Known RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	FRE4	P53746	719 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	PLB2	Q03674	706 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	LDS2	Q08218	356 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	FSH3	Q99369	266 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	FUS3	P16892	353 aa	Known RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	MSN1	P22148	382 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	CPR2	P23285	205 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	MLF3	P32047	452 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	TIF3	P34167	436 aa	Known RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	ELF1	P36053	145 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	AUR1	P36107	401 aa	Predicted RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	SHU1	P38751	150 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	YEA4	P40004	342 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	HXT9	P40885	567 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	UBX6	P47049	396 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	YNR040W	P53736	256 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	HXT11	P54862	567 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	CTK1	Q03957	528 aa	Known RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	ARV1	Q06541	321 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	MLP1	Q02455	1875 aa	Known RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	LNP1	P38878	278 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	EMC5	P40540	141 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	RHO5	P53879	331 aa	Known RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	BUD20	Q08004	166 aa	Predicted RBP	3.41	□□□□□ -1.86
RPO21	YDL140C	CSM4	Q08955	156 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	POM33	Q12164	279 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	IZH2	Q12442	317 aa		3.41	□□□□□ -1.86
RPO21	YDL140C	MET17	P06106	444 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	NOP1	P15646	327 aa	Known RBP	3.4	□□□□□ -1.86
RPO21	YDL140C	TRX3	P25372	127 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	TRS65	P32893	560 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	PTC7	P38797	343 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	PSD1	P39006	500 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	SEC72	P39742	193 aa	Known RBP	3.4	□□□□□ -1.86
RPO21	YDL140C	UBC9	P50623	157 aa	Predicted RBP	3.4	□□□□□ -1.86
RPO21	YDL140C	MIG2	P53035	382 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	YDR415C	Q04033	374 aa	Predicted RBP	3.4	□□□□□ -1.86
RPO21	YDL140C	HSP31	Q04432	237 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	ERF2	Q06551	359 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	PPZ2	P33329	710 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	YKL063C	P35725	167 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	ARN1	P38731	627 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	AXL2	P38928	823 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	SNF11	P38956	169 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	SPC1	P46965	94 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	YNL165W	P53891	406 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	DIA1	P54005	336 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	ALG6	Q12001	544 aa	Known RBP	3.4	□□□□□ -1.86
RPO21	YDL140C	MCP1	Q12106	302 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	YLR146W-A	Q2V2P1	62 aa		3.4	□□□□□ -1.86
RPO21	YDL140C	HO	P09932	586 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	TRM1	P15565	570 aa	Known RBP	3.4	□□□□□ -1.87
RPO21	YDL140C	CNE1	P27825	502 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	HMX1	P32339	317 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	PPG1	P32838	368 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	MPE1	P35728	441 aa	Known RBP	3.4	□□□□□ -1.87
RPO21	YDL140C	MRPL17	P36528	281 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	BUL1	P48524	976 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	VEL1	P53058	206 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	COG5	P53951	403 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	RAX1	Q08760	435 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	YOR387C	Q08910	206 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	FRE8	Q12209	686 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	RAX2	Q12465	1220 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	HXT14	P42833	540 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	XPT1	P47165	209 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	CGR1	P53188	120 aa		3.4	□□□□□ -1.87
RPO21	YDL140C	CRH1	P53301	507 aa		3.4	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 85.5 ms