RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C YML018CQ03730 393 aa1.96□□□□□ -2.1
PRP6YBR055C YET2Q04210 160 aa1.96□□□□□ -2.1
PRP6YBR055C YDR115WQ04598 105 aa1.96□□□□□ -2.1
PRP6YBR055C LIP2Q06005 328 aa1.96□□□□□ -2.1
PRP6YBR055C NDD1Q08887 554 aa1.96□□□□□ -2.1
PRP6YBR055C MMT2Q08970 484 aa1.96□□□□□ -2.1
PRP6YBR055C RPL21BQ12672 160 aaKnown RBP1.96□□□□□ -2.1
PRP6YBR055C YKL183C-AQ3E765 70 aa1.96□□□□□ -2.1
PRP6YBR055C YBR121C-AP0C5L4 52 aa1.95□□□□□ -2.1
PRP6YBR055C BGL2P15703 313 aaKnown RBP1.95□□□□□ -2.1
PRP6YBR055C APA2P22108 325 aa1.95□□□□□ -2.1
PRP6YBR055C JEN1P36035 616 aa1.95□□□□□ -2.1
PRP6YBR055C HAM1P47119 197 aaKnown RBP1.95□□□□□ -2.1
PRP6YBR055C YJR079WP47126 109 aa1.95□□□□□ -2.1
PRP6YBR055C HSH155P49955 971 aaKnown RBP1.95□□□□□ -2.1
PRP6YBR055C TPS1Q00764 495 aaKnown RBP1.95□□□□□ -2.1
PRP6YBR055C SNZ1Q03148 297 aa1.95□□□□□ -2.1
PRP6YBR055C VPS60Q03390 229 aa1.95□□□□□ -2.1
PRP6YBR055C YMR226CQ05016 267 aaKnown RBP1.95□□□□□ -2.1
PRP6YBR055C SEC10Q06245 871 aa1.95□□□□□ -2.1
PRP6YBR055C FDH1Q08911 376 aa1.95□□□□□ -2.1
PRP6YBR055C YPL278CQ08990 100 aa1.95□□□□□ -2.1
PRP6YBR055C VIK1Q12045 647 aa1.95□□□□□ -2.1
PRP6YBR055C CAT8P39113 1433 aa1.95□□□□□ -2.1
PRP6YBR055C ARO2P28777 376 aaKnown RBP1.95□□□□□ -2.1
PRP6YBR055C HOM6P31116 359 aaKnown RBP1.95□□□□□ -2.1
PRP6YBR055C AEP1P32493 518 aa1.95□□□□□ -2.1
PRP6YBR055C SHE1P38200 338 aa1.95□□□□□ -2.1
PRP6YBR055C MIG3P39943 394 aa1.95□□□□□ -2.1
PRP6YBR055C SER33P40510 469 aa1.95□□□□□ -2.1
PRP6YBR055C REE1P40893 198 aa1.95□□□□□ -2.1
PRP6YBR055C YRB1P41920 201 aaKnown RBP1.95□□□□□ -2.1
PRP6YBR055C CWC23P52868 283 aaPredicted RBP1.95□□□□□ -2.1
PRP6YBR055C CTF19Q02732 369 aa1.95□□□□□ -2.1
PRP6YBR055C MHR1Q06630 226 aa1.95□□□□□ -2.1
PRP6YBR055C YOR292CQ08743 309 aa1.95□□□□□ -2.1
PRP6YBR055C YCT1Q12235 531 aa1.95□□□□□ -2.1
PRP6YBR055C SNU23Q12368 194 aaPredicted RBP1.95□□□□□ -2.1
PRP6YBR055C FOL3Q12676 427 aaPredicted RBP1.95□□□□□ -2.1
PRP6YBR055C AI5_BETAQ9ZZX0 354 aa1.95□□□□□ -2.1
PRP6YBR055C RAD9P14737 1309 aa1.95□□□□□ -2.1
PRP6YBR055C NUP157P40064 1391 aaKnown RBP1.94□□□□□ -2.1
PRP6YBR055C PEX3P28795 441 aa1.94□□□□□ -2.1
PRP6YBR055C TPS2P31688 896 aaKnown RBP1.94□□□□□ -2.1
PRP6YBR055C FMP46P36141 133 aaKnown RBP1.94□□□□□ -2.1
PRP6YBR055C URA8P38627 578 aaPredicted RBP1.94□□□□□ -2.1
PRP6YBR055C LIF1P53150 421 aa1.94□□□□□ -2.1
PRP6YBR055C SDS23P53172 527 aa1.94□□□□□ -2.1
PRP6YBR055C RHO3Q00245 231 aaKnown RBP1.94□□□□□ -2.1
PRP6YBR055C MRX11Q03079 207 aa1.94□□□□□ -2.1
PRP6YBR055C ADD37Q03233 198 aa1.94□□□□□ -2.1
PRP6YBR055C PLB3Q08108 686 aa1.94□□□□□ -2.1
PRP6YBR055C YCR102CP25608 368 aa1.94□□□□□ -2.1
PRP6YBR055C MRP21P38175 177 aa1.94□□□□□ -2.1
PRP6YBR055C HEK2P38199 381 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
PRP6YBR055C CUE1P38428 203 aa1.94□□□□□ -2.1
PRP6YBR055C SEN34P39707 275 aa1.94□□□□□ -2.1
PRP6YBR055C DSN1P40568 576 aa1.94□□□□□ -2.1
PRP6YBR055C YGL260WP53056 76 aa1.94□□□□□ -2.1
PRP6YBR055C COG7P53195 279 aa1.94□□□□□ -2.1
PRP6YBR055C SWS2P53937 143 aa1.94□□□□□ -2.1
PRP6YBR055C YPR098CQ06089 161 aa1.94□□□□□ -2.1
PRP6YBR055C RRS1Q08746 203 aaKnown RBP1.94□□□□□ -2.1
PRP6YBR055C NCB2Q92317 146 aa1.94□□□□□ -2.1
PRP6YBR055C YMR316C-AI2HB70 103 aa1.93□□□□□ -2.1
PRP6YBR055C YAL064W-BO13512 126 aa1.93□□□□□ -2.1
PRP6YBR055C YCR025CP25352 136 aa1.93□□□□□ -2.1
PRP6YBR055C ATG15P25641 520 aa1.93□□□□□ -2.1
PRP6YBR055C CDC50P25656 391 aa1.93□□□□□ -2.1
PRP6YBR055C IDH1P28834 360 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
PRP6YBR055C RME1P32338 300 aaKnown RBP1.93□□□□□ -2.1
PRP6YBR055C ALK2P32789 676 aaPredicted RBP1.93□□□□□ -2.1
PRP6YBR055C YBR096WP38256 230 aa1.93□□□□□ -2.1
PRP6YBR055C MED8P38304 223 aa1.93□□□□□ -2.1
PRP6YBR055C AVT7P40501 490 aa1.93□□□□□ -2.1
PRP6YBR055C YIL012WP40551 113 aa1.93□□□□□ -2.1
PRP6YBR055C PEX10Q05568 337 aa1.93□□□□□ -2.1
PRP6YBR055C HTB1P02293 131 aaKnown RBP1.93□□□□□ -2.1
PRP6YBR055C HTB2P02294 131 aa1.93□□□□□ -2.1
PRP6YBR055C CDC10P25342 322 aaKnown RBP1.93□□□□□ -2.1
PRP6YBR055C SGE1P33335 543 aa1.93□□□□□ -2.1
PRP6YBR055C MBA1P38300 278 aa1.93□□□□□ -2.1
PRP6YBR055C IGD1P43598 195 aa1.93□□□□□ -2.1
PRP6YBR055C RPL21AQ02753 160 aaKnown RBP1.93□□□□□ -2.1
PRP6YBR055C ARC18Q05933 178 aaKnown RBP1.93□□□□□ -2.1
PRP6YBR055C SRO7Q12038 1033 aa1.93□□□□□ -2.1
PRP6YBR055C YMR230W-AQ3E7B5 62 aa1.93□□□□□ -2.1
PRP6YBR055C SIR4P11978 1358 aa1.93□□□□□ -2.1
PRP6YBR055C YDR157WA0A023PZE8 133 aa1.92□□□□□ -2.1
PRP6YBR055C RPL28P02406 149 aaKnown RBP1.92□□□□□ -2.1
PRP6YBR055C RPL27AP0C2H6 136 aaKnown RBP1.92□□□□□ -2.1
PRP6YBR055C RPL27BP0C2H7 136 aaKnown RBP1.92□□□□□ -2.1
PRP6YBR055C IMP1P28627 190 aa1.92□□□□□ -2.1
PRP6YBR055C FRM2P37261 193 aa1.92□□□□□ -2.1
PRP6YBR055C KRE29P40026 464 aa1.92□□□□□ -2.1
PRP6YBR055C NBP35P52920 328 aa1.92□□□□□ -2.1
PRP6YBR055C FMP48P53233 369 aa1.92□□□□□ -2.1
PRP6YBR055C CDC123Q05791 360 aa1.92□□□□□ -2.1
PRP6YBR055C CAM1P29547 415 aaKnown RBP1.92□□□□□ -2.1
PRP6YBR055C TAF14P35189 244 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms